RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 OLAHQ9NV23 265 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 POLR3BQ9NW08 1133 aaPredicted RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 UTP6Q9NYH9 597 aaKnown RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 ERAP1Q9NZ08 941 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 ABCD2Q9UBJ2 740 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 RAP2CQ9Y3L5 183 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 OBSL1O75147 1896 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 HTTP42858 3142 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 RGSL1A5PLK6 1076 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 DCXO43602 365 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 RNASEH2AO75792 299 aaKnown RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 ZMPSTE24O75844 475 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 SLC25A27O95847 323 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 C2P06681 752 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 CDK4P11802 303 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 MPSTP25325 297 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 PSMA3P25788 255 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 EPHA3P29320 983 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 NOS2P35228 1153 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 MLH1P40692 756 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 PHKA2P46019 1235 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 POLD2P49005 469 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 BCAT1P54687 386 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 GALNT1Q10472 559 aaPredicted RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 MAP3K21Q5TCX8 1036 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 CD300LGQ6UXG3 332 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 HACD2Q6Y1H2 254 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 CLEC20AQ6ZU45 233 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 ZNF467Q7Z7K2 595 aaPredicted RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 ARHGAP12Q8IWW6 846 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 ARRDC4Q8NCT1 418 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 SHCBP1Q8NEM2 672 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 URGCPQ8TCY9 931 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 SLC16A10Q8TF71 515 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 CLMNQ96JQ2 1002 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 SPATA33Q96N06 139 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 PRDM12Q9H4Q4 367 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 MAN1C1Q9NR34 630 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 PIM2Q9P1W9 311 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 TMEM181Q9P2C4 612 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 SUCOQ9UBS9 1254 aaKnown RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 ZNHIT2Q9UHR6 403 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 APOBEC2Q9Y235 224 aaKnown RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 ANKRD6Q9Y2G4 727 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 COPG1Q9Y678 874 aaKnown RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 UBFD1O14562 309 aaKnown RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 NRP1O14786 923 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 DLX3O60479 287 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 NPHS1O60500 1241 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 SNAI1O95863 264 aaPredicted RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 COL6A2P12110 1019 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 LRPAP1P30533 357 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 GJA5P36382 358 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 PPARGP37231 505 aaPredicted RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 PRKAA2P54646 552 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 KCNC4Q03721 635 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 ZBTB16Q05516 673 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 CBX2Q14781 532 aaPredicted RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 DCAF4L1Q3SXM0 396 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 MGAT5BQ3V5L5 792 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 NADK2Q4G0N4 442 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 TCHHL1Q5QJ38 904 aaPredicted RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 LIPMQ5VYY2 423 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 HEATR6Q6AI08 1181 aaKnown RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 ELMSAN1Q6PJG2 1045 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 PAOXQ6QHF9 649 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 GPRIN1Q7Z2K8 1008 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 RSPH3Q86UC2 560 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 CTAGE3PQ8IX95 158 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 LZTR1Q8N653 840 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 EFCAB3Q8N7B9 438 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 OR52K1Q8NGK4 314 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 RNF217Q8TC41 542 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 FAM110BQ8TC76 370 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 GAB3Q8WWW8 586 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 NDRG1Q92597 394 aaKnown RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 FATE1Q969F0 183 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 DGCR14Q96DF8 476 aaKnown RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 ZNF668Q96K58 619 aaPredicted RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 UBXN10Q96LJ8 280 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 FERMT1Q9BQL6 677 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 RTP3Q9BQQ7 232 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 DUSP16Q9BY84 665 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 MRPS26Q9BYN8 205 aaKnown RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 CAB39LQ9H9S4 337 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 SETD4Q9NVD3 440 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 PIH1D1Q9NWS0 290 aaKnown RBP4.5□□□□□ -1.69
CTSC-208ENST00000533897 ZNF639Q9UID6 485 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 FBXW11Q9UKB1 542 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 ARHGAP26Q9UNA1 814 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 IKBKGQ9Y6K9 419 aa4.5□□□□□ -1.69
CTSC-208ENST00000533897 ERI2A8K979 691 aaKnown RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 INO80B-WBP1J3KQ70 363 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 TK2O00142 265 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 HDAC3O15379 428 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 ZBTB24O43167 697 aaPredicted RBP4.49□□□□□ -1.69
CTSC-208ENST00000533897 VTNP04004 478 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 KRT19P08727 400 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 P4HA1P13674 534 aa4.49□□□□□ -1.69
CTSC-208ENST00000533897 ARSAP15289 507 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms