RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 CARSP49589 748 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 PLTPP55058 493 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 CDH4P55283 916 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 OXCT1P55809 520 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 YBEYP58557 167 aaPredicted RBP11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 MRPS25P82663 173 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 SARNPP82979 210 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 ZP2Q05996 745 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 PPIDQ08752 370 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 GALNT2Q10471 571 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 HTR4Q13639 388 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 ITPRIPL1Q6GPH6 555 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 FBXL22Q6P050 247 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 NPNTQ6UXI9 565 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 ARHGEF18Q6ZSZ5 1173 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 HTR3DQ70Z44 454 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 CHST9Q7L1S5 443 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 HDXQ7Z353 690 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 YAF2Q8IY57 180 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 UMODL1-AS1Q8N2C9 162 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 DEPDC1BQ8WUY9 529 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 CAVIN3Q969G5 261 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 KXD1Q9BQD3 176 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 KCNK12Q9HB15 430 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 GOLGA6AQ9NYA3 693 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 STOML2Q9UJZ1 356 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 TRHDEQ9UKU6 1024 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 TPX2Q9ULW0 747 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 SNX24Q9Y343 169 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 NUMBLQ9Y6R0 609 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 UNC80Q8N2C7 3258 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 A0A1B0GVM2 712 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 TCAF2A6NFQ2 919 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 C5orf60A6NFR6 353 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 ZSCAN5CA6NGD5 496 aaPredicted RBP11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 RAMP2O60895 175 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 GCATO75600 419 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 CYBBP04839 570 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 IRF1P10914 325 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 CCNCP24863 283 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 RBL1P28749 1068 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 OR1E1P30953 314 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 RPL21P46778 160 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 VPS41P49754 854 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 FCHO2Q0JRZ9 810 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 PRKD1Q15139 912 aaPredicted RBP11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 ZNF77Q15935 545 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 C5orf22Q49AR2 442 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 IZUMO3Q5VZ72 239 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 PPIL6Q8IXY8 311 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 CCDC13Q8IYE1 715 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 LGI2Q8N0V4 545 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 HJURPQ8NCD3 748 aaPredicted RBP11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 ADAMTS19Q8TE59 1207 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 AENQ8WTP8 325 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 ART4Q93070 314 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 OTUB2Q96DC9 234 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 PRMT1Q99873 361 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 TRMT61BQ9BVS5 477 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 PHACTR1Q9C0D0 580 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 ETNK2Q9NVF9 386 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 AGO1Q9UL18 857 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 NEU2Q9Y3R4 380 aa11.18□□□□□ -0.62
CCDC90B-218ENST00000533761 A0A0A0MRY4 1105 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 E7EVH7 732 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 DFFAO00273 331 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 DNALI1O14645 258 aaPredicted RBP11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 KLKB1P03952 638 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 FDFT1P37268 417 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 BASP1P80723 227 aaKnown RBP11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 USP4Q13107 963 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 ZNF177Q13360 481 aaPredicted RBP11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 TRIP13Q15645 432 aaPredicted RBP11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 SPDYCQ5MJ68 293 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 BEND6Q5SZJ8 279 aaPredicted RBP11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 VITQ6UXI7 678 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 ZNF783Q6ZMS7 281 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 SETD3Q86TU7 594 aaPredicted RBP11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 ZNF354CQ86Y25 554 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 BBS5Q8N3I7 341 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 SLC44A3Q8N4M1 653 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 ST13P5Q8NFI4 369 aaPredicted RBP11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 OSCP1Q8WVF1 389 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 FATE1Q969F0 183 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 RSPRY1Q96DX4 576 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 SPATA13Q96N96 652 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 LRRC3BQ96PB8 259 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 TSGA13Q96PP4 275 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 RPP25Q9BUL9 199 aaKnown RBP11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 XPO7Q9UIA9 1087 aaKnown RBP11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 HPCAL4Q9UM19 191 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 NEU3Q9UQ49 428 aa11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 HELZP42694 1942 aaKnown RBP11.17□□□□□ -0.62
CCDC90B-218ENST00000533761 ERI2A8K979 691 aaKnown RBP11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 AP3B1O00203 1094 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 RNF103O00237 685 aa11.16□□□□□ -0.62
CCDC90B-218ENST00000533761 CHADO15335 359 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms