RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	ZNF713	Q8N859	430 aa	Predicted RBP	6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	NAXE	Q8NCW5	288 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	RDM1	Q8NG50	284 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	OR5AN1	Q8NGI8	311 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	ZNF461	Q8TAF7	563 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	CSGALNACT1	Q8TDX6	532 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	RABGGTA	Q92696	567 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	GFM2	Q969S9	779 aa	Known RBP	6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	RSPRY1	Q96DX4	576 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	NLRP4	Q96MN2	994 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	TUBGCP5	Q96RT8	1024 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	DPYSL5	Q9BPU6	564 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	JPH2	Q9BR39	696 aa	Predicted RBP	6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	NELFA	Q9H3P2	528 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	SLC32A1	Q9H598	525 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	ARFGAP3	Q9NP61	516 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	EMC7	Q9NPA0	242 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	RASSF1	Q9NS23	344 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	KCMF1	Q9P0J7	381 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	DKK4	Q9UBT3	224 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	LRCH1	Q9Y2L9	728 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	TESMIN	Q9Y4I5	508 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	HES2	Q9Y543	173 aa		6.15	□□□□□ -1.42
PUM1-222	ENST00000531867	PTPRD	P23468	1912 aa		6.15	□□□□□ -1.43
PUM1-222	ENST00000531867	ATG2B	Q96BY7	2078 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	FREM2	Q5SZK8	3169 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	URB1	O60287	2271 aa	Known RBP	6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	APC2	O95996	2303 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	KIAA1549L	Q6ZVL6	1849 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	NUP210	Q8TEM1	1887 aa	Predicted RBP	6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	EIF4E1B	A6NMX2	242 aa	Known RBP	6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	SLC38A8	A6NNN8	435 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	TMEM189-UBE2V1	I3L0A0	370 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	MATN2	O00339	956 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	SH2B2	O14492	632 aa	Predicted RBP	6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	TPP1	O14773	563 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	MSH4	O15457	936 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	TLR5	O60602	858 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	ATG13	O75143	517 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	PSMD10	O75832	226 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	AGR2	O95994	175 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	LIFR	P42702	1097 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	MAPK9	P45984	424 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	NAPA	P54920	295 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	IRX4	P78413	519 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	SIM1	P81133	766 aa	Predicted RBP	6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	TRIM14	Q14142	442 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	KARS	Q15046	597 aa	Known RBP	6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	PON2	Q15165	354 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	TOMM20	Q15388	145 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	TMEM196	Q5HYL7	178 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	PMS2CL	Q68D20	193 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	SLC8B1	Q6J4K2	584 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	TIGD7	Q6NT04	549 aa	Predicted RBP	6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	NOTUM	Q6P988	496 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	CD300LG	Q6UXG3	332 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	CCNI2	Q6ZMN8	369 aa	Predicted RBP	6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	ANO5	Q75V66	913 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	RASSF3	Q86WH2	238 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	FUK	Q8N0W3	1084 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	CHCHD4	Q8N4Q1	142 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	FANCB	Q8NB91	859 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	LEMD2	Q8NC56	503 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	LSM14A	Q8ND56	463 aa	Known RBP	6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	SLC35G2	Q8TBE7	412 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	PRPF31	Q8WWY3	499 aa	Known RBP	6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	CFHR4	Q92496	578 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	SLC5A5	Q92911	643 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	CCDC138	Q96M89	665 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	PPM1M	Q96MI6	270 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	LRRC3B	Q96PB8	259 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	TAAR9	Q96RI9	348 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	NAA15	Q9BXJ9	866 aa	Known RBP	6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	GPR88	Q9GZN0	384 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	UNC45A	Q9H3U1	944 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	DHX33	Q9H6R0	707 aa	Known RBP	6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	DIAPH3	Q9NSV4	1193 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	OXSM	Q9NWU1	459 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	BARHL2	Q9NY43	387 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	CACNG4	Q9UBN1	327 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	RAI2	Q9Y5P3	530 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867	PTPRB	P23467	1997 aa		6.14	□□□□□ -1.43
PUM1-222	ENST00000531867		A0A087WV48	116 aa		6.13	□□□□□ -1.43
PUM1-222	ENST00000531867	SPAAR	A0A1B0GVQ0	90 aa		6.13	□□□□□ -1.43
PUM1-222	ENST00000531867	ESYT2	A0FGR8	921 aa		6.13	□□□□□ -1.43
PUM1-222	ENST00000531867	PRSS47	A8MTI9	375 aa		6.13	□□□□□ -1.43
PUM1-222	ENST00000531867		J3KRW8	73 aa		6.13	□□□□□ -1.43
PUM1-222	ENST00000531867	TRDMT1	O14717	391 aa	Known RBP	6.13	□□□□□ -1.43
PUM1-222	ENST00000531867	ADAMTS3	O15072	1205 aa		6.13	□□□□□ -1.43
PUM1-222	ENST00000531867	DCLK1	O15075	740 aa		6.13	□□□□□ -1.43
PUM1-222	ENST00000531867	ASAP2	O43150	1006 aa		6.13	□□□□□ -1.43
PUM1-222	ENST00000531867	AP1G1	O43747	822 aa		6.13	□□□□□ -1.43
PUM1-222	ENST00000531867	HRG	P04196	525 aa		6.13	□□□□□ -1.43
PUM1-222	ENST00000531867	PRB1	P04280	392 aa		6.13	□□□□□ -1.43
PUM1-222	ENST00000531867	TNFRSF1A	P19438	455 aa		6.13	□□□□□ -1.43
PUM1-222	ENST00000531867	SLC9A1	P19634	815 aa		6.13	□□□□□ -1.43
PUM1-222	ENST00000531867	RXRA	P19793	462 aa		6.13	□□□□□ -1.43
PUM1-222	ENST00000531867	TNFAIP3	P21580	790 aa		6.13	□□□□□ -1.43
PUM1-222	ENST00000531867	PTX3	P26022	381 aa	Predicted RBP	6.13	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms