RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 RRP7AQ9Y3A4 280 aaKnown RBP6.34□□□□□ -1.39
PCF11-202ENST00000528336 RIMBP3CA6NJZ7 1639 aa6.34□□□□□ -1.39
PCF11-202ENST00000528336 RIMBP3BA6NNM3 1639 aa6.34□□□□□ -1.39
PCF11-202ENST00000528336 RIMBP3Q9UFD9 1639 aa6.34□□□□□ -1.39
PCF11-202ENST00000528336 CTTNBP2Q8WZ74 1663 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 ZNF521Q96K83 1311 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 KIR2DS5A0A0G2JLQ3 304 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 A0A1W2PRQ8 180 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 KIR2DS3K7RE56 304 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 FIBPO43427 364 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 CNOT3O75175 753 aaKnown RBP6.33□□□□□ -1.4
PCF11-202ENST00000528336 CCT5P48643 541 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 MCM2P49736 904 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 OAZ1P54368 228 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 TBX2Q13207 712 aaPredicted RBP6.33□□□□□ -1.4
PCF11-202ENST00000528336 SMTNL2Q2TAL5 461 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 RUNDC3AQ59EK9 446 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 HMBOX1Q6NT76 420 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 HERC6Q8IVU3 1022 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 SLC44A5Q8NCS7 719 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 C2CD4CQ8TF44 421 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 SMG7Q92540 1137 aaKnown RBP6.33□□□□□ -1.4
PCF11-202ENST00000528336 THSD1Q9NS62 852 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 THAP1Q9NVV9 213 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 CWC25Q9NXE8 425 aaPredicted RBP6.33□□□□□ -1.4
PCF11-202ENST00000528336 MSRB1Q9NZV6 116 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 AGO2Q9UKV8 859 aaKnown RBP6.33□□□□□ -1.4
PCF11-202ENST00000528336 COG5Q9UP83 839 aa6.33□□□□□ -1.4
PCF11-202ENST00000528336 ERCC6L2Q5T890 1561 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 DISP1Q96F81 1524 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 DHX16O60231 1041 aaKnown RBP6.32□□□□□ -1.4
PCF11-202ENST00000528336 MOSPD3O75425 235 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 TGFB3P10600 412 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 CYP4B1P13584 511 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 TYK2P29597 1187 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 PNPLA4P41247 253 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 STAT1P42224 750 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 RXRGP48443 463 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 PAPOLAP51003 745 aaKnown RBP6.32□□□□□ -1.4
PCF11-202ENST00000528336 PLCD1P51178 756 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 GAD2Q05329 585 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 PMPCAQ10713 525 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 DLGAP5Q15398 846 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 FBXO47Q5MNV8 452 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 ISM2Q6H9L7 571 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 MZT2BQ6NZ67 158 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 MRPL10Q7Z7H8 261 aaKnown RBP6.32□□□□□ -1.4
PCF11-202ENST00000528336 ANKRD18AQ8IVF6 992 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 SCN4BQ8IWT1 228 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 DDIASQ8IXT1 998 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 NRACQ8N912 160 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 ZNF548Q8NEK5 533 aaPredicted RBP6.32□□□□□ -1.4
PCF11-202ENST00000528336 ZNF419Q96HQ0 510 aaPredicted RBP6.32□□□□□ -1.4
PCF11-202ENST00000528336 ZFYVE19Q96K21 471 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 TSPAN18Q96SJ8 248 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 TRMOQ9BU70 441 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 C1QTNF7Q9BXJ2 289 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 IL21RQ9HBE5 538 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 ZNF304Q9HCX3 659 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 TLR8Q9NR97 1041 aaKnown RBP6.32□□□□□ -1.4
PCF11-202ENST00000528336 SLC22A11Q9NSA0 550 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 TMEM248Q9NWD8 314 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 DNAJC16Q9Y2G8 782 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 AFG3L2Q9Y4W6 797 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 ARAP1Q96P48 1450 aa6.32□□□□□ -1.4
PCF11-202ENST00000528336 ZNF335Q9H4Z2 1342 aaPredicted RBP6.31□□□□□ -1.4
PCF11-202ENST00000528336 CPA1P15085 419 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 KLRC2P26717 231 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 CHRNA5P30532 468 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 ME1P48163 572 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 RHAGQ02094 409 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 SLC12A1Q13621 1099 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 TOMM20Q15388 145 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 GXYLT1Q4G148 440 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 CTXN3Q4LDR2 81 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 WDR45BQ5MNZ6 344 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 C6orf10Q5SRN2 563 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 ZSCAN30Q86W11 494 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 CCDC25Q86WR0 208 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 ANKRD44Q8N8A2 993 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 NKAIN3Q8N8D7 197 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 PYM1Q9BRP8 204 aaKnown RBP6.31□□□□□ -1.4
PCF11-202ENST00000528336 TMEM79Q9BSE2 394 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 FOXP1Q9H334 677 aaPredicted RBP6.31□□□□□ -1.4
PCF11-202ENST00000528336 RIC8AQ9NPQ8 531 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 RASSF1Q9NS23 344 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 HS3ST3B1Q9Y662 390 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 TNIKQ9UKE5 1360 aa6.31□□□□□ -1.4
PCF11-202ENST00000528336 KIAA0556O60303 1618 aa6.3□□□□□ -1.4
PCF11-202ENST00000528336 ZNF814B7Z6K7 855 aa6.3□□□□□ -1.4
PCF11-202ENST00000528336 EIF3FO00303 357 aaPredicted RBP6.3□□□□□ -1.4
PCF11-202ENST00000528336 NEURL1O76050 574 aa6.3□□□□□ -1.4
PCF11-202ENST00000528336 ARSAP15289 507 aa6.3□□□□□ -1.4
PCF11-202ENST00000528336 TNFAIP3P21580 790 aa6.3□□□□□ -1.4
PCF11-202ENST00000528336 CYP2J2P51589 502 aa6.3□□□□□ -1.4
PCF11-202ENST00000528336 RPS6KA3P51812 740 aa6.3□□□□□ -1.4
PCF11-202ENST00000528336 THOC5Q13769 683 aaKnown RBP6.3□□□□□ -1.4
PCF11-202ENST00000528336 PIK3CD-AS1Q5SR53 167 aa6.3□□□□□ -1.4
PCF11-202ENST00000528336 C1QL2Q7Z5L3 287 aa6.3□□□□□ -1.4
PCF11-202ENST00000528336 PIP4P1Q86T03 277 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms