RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 MSLNQ13421 630 aaPredicted RBP18.2■□□□□ 0.5
IKBKB-228ENST00000523517 GRB14Q14449 540 aa18.2■□□□□ 0.5
IKBKB-228ENST00000523517 KBTBD6Q86V97 674 aa18.2■□□□□ 0.5
IKBKB-228ENST00000523517 TMEM151AQ8N4L1 468 aa18.2■□□□□ 0.5
IKBKB-228ENST00000523517 COLEC11Q9BWP8 271 aa18.2■□□□□ 0.5
IKBKB-228ENST00000523517 DRC3Q9H069 523 aa18.2■□□□□ 0.5
IKBKB-228ENST00000523517 WDR55Q9H6Y2 383 aaPredicted RBP18.2■□□□□ 0.5
IKBKB-228ENST00000523517 H3BNX3 289 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 HDAC3O15379 428 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 JCHAINP01591 159 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 YBX3P16989 372 aaKnown RBP eCLIP18.19■□□□□ 0.5
IKBKB-228ENST00000523517 SERPINB5P36952 375 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 CDH17Q12864 832 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 MFSD10Q14728 455 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 FAM35AQ86V20 835 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 ZC3HC1Q86WB0 502 aaKnown RBP18.19■□□□□ 0.5
IKBKB-228ENST00000523517 MOCOSQ96EN8 888 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 CNDP1Q96KN2 507 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 C1QTNF1Q9BXJ1 281 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 TK2O00142 265 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 KIF3CO14782 793 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 CD1EP15812 388 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 PIK3R1P27986 724 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 GRIA4P48058 902 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 RPL14P50914 215 aaKnown RBP18.19■□□□□ 0.5
IKBKB-228ENST00000523517 ADAM17P78536 824 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 PRPSAP1Q14558 356 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 LIPMQ5VYY2 423 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 CTU1Q7Z7A3 348 aaKnown RBP18.19■□□□□ 0.5
IKBKB-228ENST00000523517 GALNT15Q8N3T1 639 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 ZMIZ2Q8NF64 920 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 ZFP42Q96MM3 310 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 PPP1R10Q96QC0 940 aaKnown RBP18.19■□□□□ 0.5
IKBKB-228ENST00000523517 APBA2Q99767 749 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 EPAS1Q99814 870 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 KIFC1Q9BW19 673 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 ACSS2Q9NR19 701 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 NSMCE4AQ9NXX6 385 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 RNF181Q9P0P0 153 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 OR12D3Q9UGF7 316 aa18.19■□□□□ 0.5
IKBKB-228ENST00000523517 RGSL1A5PLK6 1076 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 BTBD19C9JJ37 291 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 AP3B1O00203 1094 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 CASQ2O14958 399 aaPredicted RBP18.18■□□□□ 0.5
IKBKB-228ENST00000523517 TREHO43280 583 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 CABYRO75952 493 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 F9P00740 461 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 SBK3P0C264 359 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 UQCRBP14927 111 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 AQP4P55087 323 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 TRIP10Q15642 601 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 ARL13AQ5H913 290 aaPredicted RBP18.18■□□□□ 0.5
IKBKB-228ENST00000523517 RAB41Q5JT25 222 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 SEL1L3Q68CR1 1132 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 NAPEPLDQ6IQ20 393 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 ZSCAN18Q8TBC5 510 aaPredicted RBP18.18■□□□□ 0.5
IKBKB-228ENST00000523517 SENP8Q96LD8 212 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 TSNARE1Q96NA8 513 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 RHOJQ9H4E5 214 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 WDCPQ9H6R7 721 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 TMEM30AQ9NV96 361 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 RRN3Q9NYV6 651 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 MYBPHLA2RUH7 354 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 NEMP1O14524 444 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 AIM2O14862 343 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 PHGDHO43175 533 aaKnown RBP18.18■□□□□ 0.5
IKBKB-228ENST00000523517 LRIG2O94898 1065 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 SAT1P21673 171 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 CCR10P46092 362 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 ZNF135P52742 658 aaPredicted RBP18.18■□□□□ 0.5
IKBKB-228ENST00000523517 HK2P52789 917 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 PRKAA2P54646 552 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 MED21Q13503 144 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 USP10Q14694 798 aaKnown RBP18.18■□□□□ 0.5
IKBKB-228ENST00000523517 LSM12Q3MHD2 195 aaKnown RBP18.18■□□□□ 0.5
IKBKB-228ENST00000523517 SNX32Q86XE0 403 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 NPLOC4Q8TAT6 608 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 EDEM1Q92611 657 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 DPF3Q92784 378 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 PCED1BQ96HM7 432 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 PPP1R36Q96LQ0 422 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 TKTL2Q9H0I9 626 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 CACNG4Q9UBN1 327 aa18.18■□□□□ 0.5
IKBKB-228ENST00000523517 PRPF19Q9UMS4 504 aaKnown RBP18.18■□□□□ 0.5
IKBKB-228ENST00000523517 CCDC78A2IDD5 438 aa18.17■□□□□ 0.5
IKBKB-228ENST00000523517 GRID2O43424 1007 aa18.17■□□□□ 0.5
IKBKB-228ENST00000523517 PEX1O43933 1283 aa18.17■□□□□ 0.5
IKBKB-228ENST00000523517 PIGNO95427 931 aa18.17■□□□□ 0.5
IKBKB-228ENST00000523517 VCLP18206 1134 aa18.17■□□□□ 0.5
IKBKB-228ENST00000523517 CXCR3P49682 368 aa18.17■□□□□ 0.5
IKBKB-228ENST00000523517 NUDT2P50583 147 aa18.17■□□□□ 0.5
IKBKB-228ENST00000523517 CRYBB1P53674 252 aaPredicted RBP18.17■□□□□ 0.5
IKBKB-228ENST00000523517 PRKAA1Q13131 559 aa18.17■□□□□ 0.5
IKBKB-228ENST00000523517 PPP2R5DQ14738 602 aa18.17■□□□□ 0.5
IKBKB-228ENST00000523517 TWF2Q6IBS0 349 aaKnown RBP18.17■□□□□ 0.5
IKBKB-228ENST00000523517 OTOP3Q7RTS5 596 aa18.17■□□□□ 0.5
IKBKB-228ENST00000523517 CELF6Q96J87 481 aaKnown RBP18.17■□□□□ 0.5
IKBKB-228ENST00000523517 STK39Q9UEW8 545 aa18.17■□□□□ 0.5
IKBKB-228ENST00000523517 RUVBL2Q9Y230 463 aaKnown RBP18.17■□□□□ 0.5
IKBKB-228ENST00000523517 SLC45A1Q9Y2W3 748 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms