RNA–Protein interactions for RNA: ENST00000521214.5

SPIDR-213, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-213ENST00000521214 PACS1Q6VY07 963 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 SKA1Q96BD8 255 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 GRAMD1AQ96CP6 724 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 SMARCD1Q96GM5 515 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 ATXN7L3BQ96GX2 97 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 CCSER2Q9H7U1 834 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 VPS37BQ9H9H4 285 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 PCDHGC3Q9UN70 934 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 CCDC188H7C350 402 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 CCDC22O60826 627 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 TRUB2O95900 331 aaKnown RBP8.12□□□□□ -1.11
SPIDR-213ENST00000521214 LTFP02788 710 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 ESRRAP11474 423 aaPredicted RBP8.12□□□□□ -1.11
SPIDR-213ENST00000521214 COL6A2P12110 1019 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 RBL1P28749 1068 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 ABCG1P45844 678 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 MRPS5P82675 430 aaKnown RBP8.12□□□□□ -1.11
SPIDR-213ENST00000521214 ITGA9Q13797 1035 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 PLEKHG4Q58EX7 1191 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 IZUMO3Q5VZ72 239 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 DCLRE1AQ6PJP8 1040 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 C11orf74Q86VG3 221 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 COLGALT2Q8IYK4 626 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 ACTRT1Q8TDG2 376 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 KLF6Q99612 283 aaPredicted RBP8.12□□□□□ -1.11
SPIDR-213ENST00000521214 HNRNPABQ99729 332 aaKnown RBP8.12□□□□□ -1.11
SPIDR-213ENST00000521214 MRPL1Q9BYD6 325 aaKnown RBP8.12□□□□□ -1.11
SPIDR-213ENST00000521214 MCOLN1Q9GZU1 580 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 ARMC7Q9H6L4 198 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 WDCPQ9H6R7 721 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 AVENQ9NQS1 362 aaPredicted RBP8.12□□□□□ -1.11
SPIDR-213ENST00000521214 TMEM161AQ9NX61 479 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 ANAPC5Q9UJX4 755 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 FAM32AQ9Y421 112 aaKnown RBP8.12□□□□□ -1.11
SPIDR-213ENST00000521214 USP1O94782 785 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 GAS8O95995 478 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 IGHA2P01877 340 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 PGM1P36871 562 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 ARL4AP40617 200 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 ZNF143P52747 638 aaPredicted RBP8.12□□□□□ -1.11
SPIDR-213ENST00000521214 ASPHQ12797 758 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 ZNF598Q86UK7 904 aaKnown RBP8.12□□□□□ -1.11
SPIDR-213ENST00000521214 GAB3Q8WWW8 586 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 CD101Q93033 1021 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 NSMCE3Q96MG7 304 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 IGFLR1Q9H665 355 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 UBN1Q9NPG3 1134 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 COQ6Q9Y2Z9 468 aa8.12□□□□□ -1.11
SPIDR-213ENST00000521214 TCRBV7S3A2A0A539 114 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 NOTOA8MTQ0 251 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 RFXAPO00287 272 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 RNASEH1O60930 286 aaKnown RBP8.11□□□□□ -1.11
SPIDR-213ENST00000521214 CBX2Q14781 532 aaPredicted RBP8.11□□□□□ -1.11
SPIDR-213ENST00000521214 FBXO46Q6PJ61 603 aaPredicted RBP8.11□□□□□ -1.11
SPIDR-213ENST00000521214 KCNT2Q6UVM3 1135 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 RGS9BPQ6ZS82 235 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 DENND5BQ6ZUT9 1274 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 C16orf59Q7L2K0 433 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 TAC4Q86UU9 113 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 NPAS4Q8IUM7 802 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 KBTBD2Q8IY47 623 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 TOP6BLQ8N6T0 577 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 CFAP36Q96G28 342 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 CASD1Q96PB1 797 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 ERP44Q9BS26 406 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 SPON2Q9BUD6 331 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 DCLK3Q9C098 648 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 EBF3Q9H4W6 596 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 SAYSD1Q9NPB0 183 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 RAB6BQ9NRW1 208 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 CNTN6Q9UQ52 1028 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 ACTL7AQ9Y615 435 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 VPS13AQ96RL7 3174 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 SLC12A8A0AV02 714 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 RASA4BC9J798 803 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 GOLGA8RI6L899 631 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 RASA4O43374 803 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 TIMM44O43615 452 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 TPPPO94811 219 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 SAT1P21673 171 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 GRIA1P42261 906 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 CPA2P48052 419 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 SESN2P58004 480 aaPredicted RBP8.11□□□□□ -1.11
SPIDR-213ENST00000521214 PCSK7Q16549 785 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 FXNQ16595 210 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 C1orf146Q5VVC0 180 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 ANKRD22Q5VYY1 191 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 KLHDC10Q6PID8 442 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 CD300LGQ6UXG3 332 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 UNC93AQ86WB7 457 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 NT5DC4Q86YG4 428 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 ZBED8Q8IZ13 594 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 NUP93Q8N1F7 819 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 HIPK4Q8NE63 616 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 VPS50Q96JG6 964 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 EXOC2Q96KP1 924 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 LHX5Q9H2C1 402 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 OSER1Q9NX31 292 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 GDAP2Q9NXN4 497 aa8.11□□□□□ -1.11
SPIDR-213ENST00000521214 STX18Q9P2W9 335 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms