RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 CD160O95971 181 aa18.15■□□□□ 0.5
SDC2-205ENST00000520233 PEX11BO96011 259 aa18.15■□□□□ 0.5
SDC2-205ENST00000520233 EGFP01133 1207 aa18.15■□□□□ 0.5
SDC2-205ENST00000520233 CD72P21854 359 aa18.15■□□□□ 0.5
SDC2-205ENST00000520233 BYSLQ13895 437 aaKnown RBP18.15■□□□□ 0.5
SDC2-205ENST00000520233 RFTN1Q14699 578 aaPredicted RBP18.15■□□□□ 0.5
SDC2-205ENST00000520233 FBXO43Q4G163 708 aa18.15■□□□□ 0.5
SDC2-205ENST00000520233 INO80DQ53TQ3 878 aaPredicted RBP18.15■□□□□ 0.5
SDC2-205ENST00000520233 DARS2Q6PI48 645 aaKnown RBP18.15■□□□□ 0.5
SDC2-205ENST00000520233 LINGO4Q6UY18 593 aa18.15■□□□□ 0.5
SDC2-205ENST00000520233 B4GALNT4Q76KP1 1039 aa18.15■□□□□ 0.5
SDC2-205ENST00000520233 ZNF572Q7Z3I7 529 aaPredicted RBP18.15■□□□□ 0.5
SDC2-205ENST00000520233 SIX5Q8N196 739 aa18.15■□□□□ 0.5
SDC2-205ENST00000520233 KDM1BQ8NB78 822 aa18.15■□□□□ 0.5
SDC2-205ENST00000520233 NSMCE1Q8WV22 266 aa18.15■□□□□ 0.5
SDC2-205ENST00000520233 SORCS1Q8WY21 1168 aa18.15■□□□□ 0.5
SDC2-205ENST00000520233 MAML1Q92585 1016 aa18.15■□□□□ 0.5
SDC2-205ENST00000520233 MRGPRX3Q96LB0 322 aa18.15■□□□□ 0.5
SDC2-205ENST00000520233 UBA2Q9UBT2 640 aaPredicted RBP18.15■□□□□ 0.5
SDC2-205ENST00000520233 PLA2G4CQ9UP65 541 aa18.15■□□□□ 0.5
SDC2-205ENST00000520233 HS3ST2Q9Y278 367 aa18.15■□□□□ 0.5
SDC2-205ENST00000520233 DRG1Q9Y295 367 aaKnown RBP18.15■□□□□ 0.5
SDC2-205ENST00000520233 NYNRINQ9P2P1 1898 aaKnown RBP18.15■□□□□ 0.5
SDC2-205ENST00000520233 KANSL1LA0AUZ9 987 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 CFAP69A5D8W1 941 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 CCDC188H7C350 402 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 PHF2O75151 1096 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 HNRNPLP14866 589 aaKnown RBP eCLIP18.14■□□□□ 0.497e-7■■□□□ 12.4
SDC2-205ENST00000520233 VAV1P15498 845 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 RBL1P28749 1068 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 NNMTP40261 264 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 KIR2DL1P43626 348 aaPredicted RBP18.14■□□□□ 0.49
SDC2-205ENST00000520233 SERPINH1P50454 418 aaKnown RBP18.14■□□□□ 0.49
SDC2-205ENST00000520233 CLCN6P51797 869 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 SNX1Q13596 522 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 HNRNPDQ14103 355 aaKnown RBP18.14■□□□□ 0.49
SDC2-205ENST00000520233 OASLQ15646 514 aaKnown RBP18.14■□□□□ 0.49
SDC2-205ENST00000520233 PTPRNQ16849 979 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 TMCO4Q5TGY1 634 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 HEATR6Q6AI08 1181 aaKnown RBP18.14■□□□□ 0.49
SDC2-205ENST00000520233 LEKR1Q6ZMV7 388 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 METTL3Q86U44 580 aaKnown RBP18.14■□□□□ 0.49
SDC2-205ENST00000520233 CCDC26Q8TAB7 109 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 KCNV2Q8TDN2 545 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 CYB5D2Q8WUJ1 264 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 HTR3CQ8WXA8 447 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 EDAQ92838 391 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 MAGOHBQ96A72 148 aaKnown RBP18.14■□□□□ 0.49
SDC2-205ENST00000520233 RPL10LQ96L21 214 aaKnown RBP18.14■□□□□ 0.49
SDC2-205ENST00000520233 NELL2Q99435 816 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 FERMT1Q9BQL6 677 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 LTB4R2Q9NPC1 389 aa18.14■□□□□ 0.49
SDC2-205ENST00000520233 THAP10Q9P2Z0 257 aaPredicted RBP18.14■□□□□ 0.49
SDC2-205ENST00000520233 MIA3Q5JRA6 1907 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 NUP205Q92621 2012 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 NPC1O15118 1278 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 DCXO43602 365 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 MT-CO1P00395 513 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 ITGAVP06756 1048 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 SRCP12931 536 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 CCNB1P14635 433 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 STIP1P31948 543 aaKnown RBP18.13■□□□□ 0.49
SDC2-205ENST00000520233 STK19P49842 368 aaPredicted RBP18.13■□□□□ 0.49
SDC2-205ENST00000520233 RENBPP51606 427 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 ST8SIA6P61647 398 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 IFI35P80217 286 aaPredicted RBP18.13■□□□□ 0.49
SDC2-205ENST00000520233 SIGLEC14Q08ET2 396 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 CCINQ13939 588 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 LBRQ14739 615 aaKnown RBP18.13■□□□□ 0.49
SDC2-205ENST00000520233 DGKKQ5KSL6 1271 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 EMC10Q5UCC4 262 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 MARC1Q5VT66 337 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 ZNF687Q8N1G0 1237 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 SH2D3CQ8N5H7 860 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 TEX26Q8N6G2 289 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 ATP11CQ8NB49 1132 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 SPATA4Q8NEY3 305 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 MYO19Q96H55 970 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 C10orf88Q9H8K7 445 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 USP29Q9HBJ7 922 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 SLCO3A1Q9UIG8 710 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 HCN2Q9UL51 889 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 NDRG2Q9UN36 371 aaKnown RBP18.13■□□□□ 0.49
SDC2-205ENST00000520233 ZNF148Q9UQR1 794 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 ACTL7AQ9Y615 435 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 COL6A3P12111 3177 aa18.13■□□□□ 0.49
SDC2-205ENST00000520233 KCNK1O00180 336 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 KCNN4O15554 427 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 ATP9BO43861 1147 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 TMCC1O94876 653 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 CHRM1P11229 460 aaPredicted RBP18.12■□□□□ 0.49
SDC2-205ENST00000520233 TARSP26639 723 aaKnown RBP18.12■□□□□ 0.49
SDC2-205ENST00000520233 CHRNA3P32297 505 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 COILP38432 576 aaPredicted RBP18.12■□□□□ 0.49
SDC2-205ENST00000520233 FNTAP49354 379 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 MRPS21P82921 87 aaKnown RBP18.12■□□□□ 0.49
SDC2-205ENST00000520233 SLC10A7Q0GE19 358 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 ZNF234Q14588 700 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 CYTH1Q15438 398 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 EGFLAMQ63HQ2 1017 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms