RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 MMP2P08253 660 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 TSPY4P0CV99 314 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 TSPY10P0CW01 314 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 PRG2P13727 222 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 SNRPBP14678 240 aaKnown RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 CD19P15391 556 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 PNLIPP16233 465 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 ZFXP17010 805 aaPredicted RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 TRIM21P19474 475 aaKnown RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 DRD1P21728 446 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 SDHBP21912 280 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 TCEA1P23193 301 aaKnown RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 CCNCP24863 283 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 LRPAP1P30533 357 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 PRKAR1BP31321 381 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 PBX1P40424 430 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 CASRP41180 1078 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 ACAA2P42765 397 aaKnown RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 KIR2DL3P43628 341 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 ATP5OP48047 213 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 RAB28P51157 221 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 TIRAPP58753 221 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 ACTR1AP61163 376 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 RPL15P61313 204 aaKnown RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 NKX3-2P78367 333 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 CCNA1P78396 465 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 FAM189BP81408 668 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 ARHGAP8P85298 464 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 GBE1Q04446 702 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 CETN1Q12798 172 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 BFSP2Q13515 415 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 RPS6KA1Q15418 735 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 GRIK4Q16099 956 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 CR1LQ2VPA4 569 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 USP39Q53GS9 565 aaKnown RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 C6orf163Q5TEZ5 329 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 C12orf60Q5U649 245 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 CCDC144NLQ6NUI1 221 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 ARHGAP11AQ6P4F7 1023 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 TSSK4Q6SA08 328 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 PPP1R21Q6ZMI0 780 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 RUFY3Q7L099 469 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 KCTD9Q7L273 389 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 PARS2Q7L3T8 475 aaKnown RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 PPP1R32Q7Z5V6 425 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 CAMKMTQ7Z624 323 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 CLEC14AQ86T13 490 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 FAM160B2Q86V87 743 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 IQCHQ86VS3 1027 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 IQCF2Q8IXL9 164 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 ZDHHC14Q8IZN3 488 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 TC2NQ8N9U0 490 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 NHLRC2Q8NBF2 726 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 XXYLT1Q8NBI6 393 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 PLA2G15Q8NCC3 412 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 PDPRQ8NCN5 879 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 TBC1D15Q8TC07 691 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 URGCPQ8TCY9 931 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 CLEC4CQ8WTT0 213 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 RNF139Q8WU17 664 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 TEKT4Q8WW24 435 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 TUBGCP3Q96CW5 907 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 LRIG1Q96JA1 1093 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 LINC00615Q96LM1 132 aaPredicted RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 KLHL32Q96NJ5 620 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 INTS14Q96SY0 518 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 VKORC1Q9BQB6 163 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 PAAF1Q9BRP4 392 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 SYT17Q9BSW7 474 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 TLR10Q9BXR5 811 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 COL25A1Q9BXS0 654 aaPredicted RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 CACNG6Q9BXT2 260 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 ACPTQ9BZG2 426 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 ISCUQ9H1K1 167 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 EPHX3Q9H6B9 360 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 USP29Q9HBJ7 922 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 CYP39A1Q9NYL5 469 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 WSB2Q9NYS7 404 aaPredicted RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 TMOD2Q9NZR1 351 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 OGFRQ9NZT2 677 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 CWC15Q9P013 229 aaKnown RBP4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 FAM153AQ9UHL3 310 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 ZFP69BQ9UJL9 534 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 CDH7Q9ULB5 785 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 SLC27A6Q9Y2P4 619 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 TMED5Q9Y3A6 229 aa4.09□□□□□ -1.75
RNU4-60P-201ENST00000517239 A0A1W2PQF6 199 aa4.08□□□□□ -1.76
RNU4-60P-201ENST00000517239 CDRT15L2A8MXV6 281 aa4.08□□□□□ -1.76
RNU4-60P-201ENST00000517239 CXorf49A8MYA2 514 aaPredicted RBP4.08□□□□□ -1.76
RNU4-60P-201ENST00000517239 GRM8O00222 908 aa4.08□□□□□ -1.76
RNU4-60P-201ENST00000517239 POLRMTO00411 1230 aaKnown RBP4.08□□□□□ -1.76
RNU4-60P-201ENST00000517239 PAPSS1O43252 624 aaPredicted RBP4.08□□□□□ -1.76
RNU4-60P-201ENST00000517239 HS6ST1O60243 411 aa4.08□□□□□ -1.76
RNU4-60P-201ENST00000517239 DDAH2O95865 285 aa4.08□□□□□ -1.76
RNU4-60P-201ENST00000517239 ONECUT2O95948 504 aa4.08□□□□□ -1.76
RNU4-60P-201ENST00000517239 POMCP01189 267 aa4.08□□□□□ -1.76
RNU4-60P-201ENST00000517239 AMHP03971 560 aa4.08□□□□□ -1.76
RNU4-60P-201ENST00000517239 HMGCRP04035 888 aa4.08□□□□□ -1.76
RNU4-60P-201ENST00000517239 CEACAM5P06731 702 aa4.08□□□□□ -1.76
RNU4-60P-201ENST00000517239 GALTP07902 379 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms