RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 TTLL2Q9BWV7 592 aa-0.98□□□□□ -2.57
SNORA40.16-201ENST00000517238 TMX4Q9H1E5 349 aaPredicted RBP-0.98□□□□□ -2.57
SNORA40.16-201ENST00000517238 UPF3AQ9H1J1 476 aaKnown RBP-0.98□□□□□ -2.57
SNORA40.16-201ENST00000517238 MMP25Q9NPA2 562 aa-0.98□□□□□ -2.57
SNORA40.16-201ENST00000517238 TOMM22Q9NS69 142 aa-0.98□□□□□ -2.57
SNORA40.16-201ENST00000517238 SMARCAL1Q9NZC9 954 aa-0.98□□□□□ -2.57
SNORA40.16-201ENST00000517238 NUDT4Q9NZJ9 180 aa-0.98□□□□□ -2.57
SNORA40.16-201ENST00000517238 LRWD1Q9UFC0 647 aa-0.98□□□□□ -2.57
SNORA40.16-201ENST00000517238 ZFP37Q9Y6Q3 630 aaPredicted RBP-0.98□□□□□ -2.57
SNORA40.16-201ENST00000517238 DISP3Q9P2K9 1392 aa-0.98□□□□□ -2.57
SNORA40.16-201ENST00000517238 CARNS1A5YM72 827 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 C16orf96A6NNT2 1141 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 FOXO6A8MYZ6 492 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 M0R3H8 397 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 SNAI2O43623 268 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 ENDOD1O94919 500 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 ANXA1P04083 346 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 RPS2P15880 293 aaKnown RBP-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 CREB1P16220 341 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 POU3F2P20265 443 aaPredicted RBP-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 HALP42357 657 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 SOX2P48431 317 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 AARSP49588 968 aaKnown RBP eCLIP-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 CPT1AP50416 773 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 CSTF1Q05048 431 aaKnown RBP-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 MYO1EQ12965 1108 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 KLF1Q13351 362 aaPredicted RBP-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 TNFAIP1Q13829 316 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 NECTIN1Q15223 517 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 PTCHD3Q3KNS1 767 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 SLC10A6Q3KNW5 377 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 WDR38Q5JTN6 314 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 HS2ST1Q7LGA3 356 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 KDELC2Q7Z4H8 507 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 LAS2Q8IYD9 372 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 DCBLD1Q8N8Z6 715 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 CCDC71LQ8N9Z2 235 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 PHOSPHO2Q8TCD6 241 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 SEMA4DQ92854 862 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 SCAMP4Q969E2 229 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 MFSD3Q96ES6 412 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 KAZALD1Q96I82 304 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 TNIP3Q96KP6 325 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 TRAPPC9Q96Q05 1148 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 PTDSS2Q9BVG9 487 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 UPF2Q9HAU5 1272 aaKnown RBP-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 USP29Q9HBJ7 922 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 ZNF71Q9NQZ8 489 aaPredicted RBP-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 NECAP2Q9NVZ3 263 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 ZNF224Q9NZL3 707 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 PARP2Q9UGN5 583 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 MSRAQ9UJ68 235 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 RIMKLBQ9ULI2 386 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 TNNQ9UQP3 1299 aa-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 SRPRBQ9Y5M8 271 aaKnown RBP-0.99□□□□□ -2.57
SNORA40.16-201ENST00000517238 SHANK1Q9Y566 2161 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 FAM168BA1KXE4 195 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 DYTNA2CJ06 578 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 PINLYPA6NC86 204 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 TMEM8BA6NDV4 472 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 PRSS29PA6NIE9 313 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 NPIPB5A8MRT5 1133 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 KPNA7A9QM74 516 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 NPIPB4C9JG80 1138 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 ZNF324O75467 553 aaPredicted RBP-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 DNAJC8O75937 253 aaPredicted RBP-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 PIGNO95427 931 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 C22orf31O95567 290 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 CHEK2O96017 543 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 AMY1AP04745 511 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 CDH1P12830 882 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 NR2C1P13056 603 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 GNLYP22749 145 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 CHATP28329 748 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 ADORA2AP29274 412 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 SSTR2P30874 369 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 DCTP40126 519 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 THPOP40225 353 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 VPS41P49754 854 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 GPM6AP51674 278 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 ZNF135P52742 658 aaPredicted RBP-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 HAP1P54257 671 aaPredicted RBP-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 PFN3P60673 137 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 PSMC1P62191 440 aaKnown RBP-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 ADARB1P78563 741 aaKnown RBP-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 IGLV3-21P80748 117 aaPredicted RBP-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 MRPL58Q14197 206 aaKnown RBP-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 KCTD19Q17RG1 926 aaPredicted RBP-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 YOD1Q5VVQ6 348 aaPredicted RBP-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 ZNF852Q6ZMS4 543 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 LYSMD2Q8IV50 215 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 SLC41A1Q8IVJ1 513 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 HERC6Q8IVU3 1022 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 DENND6AQ8IWF6 608 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 ZGPATQ8N5A5 531 aaKnown RBP-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 IGSF22Q8N9C0 903 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 TMEM87AQ8NBN3 555 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 Q8NDZ9 215 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 MRAPQ8TCY5 172 aa-1□□□□□ -2.57
SNORA40.16-201ENST00000517238 MKL1Q969V6 931 aa-1□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms