RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 ZFAND4Q86XD8 727 aa11.14□□□□□ -0.63
NFKB1-211ENST00000513803 DTX1Q86Y01 620 aa11.14□□□□□ -0.63
NFKB1-211ENST00000513803 SLC9A9Q8IVB4 645 aa11.14□□□□□ -0.63
NFKB1-211ENST00000513803 SLC35F3Q8IY50 421 aa11.14□□□□□ -0.63
NFKB1-211ENST00000513803 SCML4Q8N228 414 aa11.14□□□□□ -0.63
NFKB1-211ENST00000513803 SLC4A11Q8NBS3 891 aa11.14□□□□□ -0.63
NFKB1-211ENST00000513803 TMEM174Q8WUU8 243 aa11.14□□□□□ -0.63
NFKB1-211ENST00000513803 ERCC4Q92889 916 aaPredicted RBP11.14□□□□□ -0.63
NFKB1-211ENST00000513803 MYEOVQ96EZ4 313 aa11.14□□□□□ -0.63
NFKB1-211ENST00000513803 FAXDC2Q96IV6 333 aa11.14□□□□□ -0.63
NFKB1-211ENST00000513803 NUCKS1Q9H1E3 243 aaKnown RBP11.14□□□□□ -0.63
NFKB1-211ENST00000513803 SLC39A2Q9NP94 309 aa11.14□□□□□ -0.63
NFKB1-211ENST00000513803 DYRK4Q9NR20 520 aa11.14□□□□□ -0.63
NFKB1-211ENST00000513803 TMPRSS4Q9NRS4 437 aa11.14□□□□□ -0.63
NFKB1-211ENST00000513803 GPR27Q9NS67 375 aa11.14□□□□□ -0.63
NFKB1-211ENST00000513803 SLC25A13Q9UJS0 675 aa11.14□□□□□ -0.63
NFKB1-211ENST00000513803 SMC3Q9UQE7 1217 aa11.14□□□□□ -0.63
NFKB1-211ENST00000513803 PLAAQ9Y263 795 aa11.14□□□□□ -0.63
NFKB1-211ENST00000513803 PRAMEF33A0A0G2JMD5 474 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 POM121BA6NF01 834 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 LMO7DNF2Z398 122 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 TULP2O00295 520 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 KPNA3O00505 521 aaPredicted RBP11.13□□□□□ -0.63
NFKB1-211ENST00000513803 CASC3O15234 703 aaKnown RBP11.13□□□□□ -0.63
NFKB1-211ENST00000513803 PRAMEF10O60809 474 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 WT1P19544 449 aaPredicted RBP11.13□□□□□ -0.63
NFKB1-211ENST00000513803 CCKBRP32239 447 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 RAD23BP54727 409 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 ADKP55263 362 aaKnown RBP11.13□□□□□ -0.63
NFKB1-211ENST00000513803 RPS21P63220 83 aaKnown RBP11.13□□□□□ -0.63
NFKB1-211ENST00000513803 CEBPZQ03701 1054 aaKnown RBP11.13□□□□□ -0.63
NFKB1-211ENST00000513803 BST2Q10589 180 aaKnown RBP11.13□□□□□ -0.63
NFKB1-211ENST00000513803 GOLGA7BQ2TAP0 167 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 TMEM164Q5U3C3 297 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 KYAT3Q6YP21 454 aaKnown RBP11.13□□□□□ -0.63
NFKB1-211ENST00000513803 LGI2Q8N0V4 545 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 TMIEQ8NEW7 156 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 TAS1R2Q8TE23 839 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 SCG3Q8WXD2 468 aaKnown RBP11.13□□□□□ -0.63
NFKB1-211ENST00000513803 IRGQQ8WZA9 623 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 TATDN2Q93075 761 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 FEM1CQ96JP0 617 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 CCDC114Q96M63 670 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 C7orf25Q9BPX7 421 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 SLC12A9Q9BXP2 914 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 SLC17A9Q9BYT1 436 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 FOXP3Q9BZS1 431 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 CISHQ9NSE2 258 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 KLF15Q9UIH9 416 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 FRMD4BQ9Y2L6 1034 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 LOXL2Q9Y4K0 774 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 FBN2P35556 2912 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 UNC13CQ8NB66 2214 aa11.13□□□□□ -0.63
NFKB1-211ENST00000513803 COL27A1Q8IZC6 1860 aaPredicted RBP11.12□□□□□ -0.63
NFKB1-211ENST00000513803 ITPR3Q14573 2671 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 D6RAR5 112 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 FPGTO14772 594 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 BNIP3LO60238 219 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 GCATO75600 419 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 KRT38O76015 456 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 AGFG2O95081 481 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 PAK4O96013 591 aaPredicted RBP11.12□□□□□ -0.63
NFKB1-211ENST00000513803 LCP1P13796 627 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 PDGFRAP16234 1089 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 GCLMP48507 274 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 CD97P48960 835 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 VAMP7P51809 220 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 DAOAP59103 153 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 SGCGQ13326 291 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 PDE1CQ14123 709 aaPredicted RBP11.12□□□□□ -0.63
NFKB1-211ENST00000513803 PTK2BQ14289 1009 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 TMEM259Q4ZIN3 620 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 PRRT3Q5FWE3 981 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 SEL1L3Q68CR1 1132 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 Q6ZVU0 165 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 IQUBQ8NA54 791 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 C9orf43Q8TAL5 461 aaPredicted RBP11.12□□□□□ -0.63
NFKB1-211ENST00000513803 USP7Q93009 1102 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 MIB2Q96AX9 1013 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 PPP1R13BQ96KQ4 1090 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 FCRL2Q96LA5 508 aaPredicted RBP11.12□□□□□ -0.63
NFKB1-211ENST00000513803 SERPINB11Q96P15 392 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 CATSPER2Q96P56 530 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 CMKLR1Q99788 373 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 B3GNT4Q9C0J1 378 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 ZNF71Q9NQZ8 489 aaPredicted RBP11.12□□□□□ -0.63
NFKB1-211ENST00000513803 GULP1Q9UBP9 304 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 TSPAN16Q9UKR8 245 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 ZFR2Q9UPR6 939 aaKnown RBP11.12□□□□□ -0.63
NFKB1-211ENST00000513803 TLR6Q9Y2C9 796 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 CELSR2Q9HCU4 2923 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 TRPM6Q9BX84 2022 aa11.12□□□□□ -0.63
NFKB1-211ENST00000513803 ZFC3H1O60293 1989 aaKnown RBP11.11□□□□□ -0.63
NFKB1-211ENST00000513803 PVALEFA0A1B0GWK0 134 aa11.11□□□□□ -0.63
NFKB1-211ENST00000513803 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.11□□□□□ -0.63
NFKB1-211ENST00000513803 SPTLC2O15270 562 aa11.11□□□□□ -0.63
NFKB1-211ENST00000513803 YY2O15391 372 aa11.11□□□□□ -0.63
NFKB1-211ENST00000513803 MOCS2O96007 188 aaPredicted RBP11.11□□□□□ -0.63
NFKB1-211ENST00000513803 LTFP02788 710 aa11.11□□□□□ -0.63
NFKB1-211ENST00000513803 PRNPP04156 253 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms