RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.13□□□□□ -1.11
PFDN1-202ENST00000507185 XKR9Q5GH70 373 aa8.13□□□□□ -1.11
PFDN1-202ENST00000507185 LAIR1Q6GTX8 287 aa8.13□□□□□ -1.11
PFDN1-202ENST00000507185 NCAPH2Q6IBW4 605 aa8.13□□□□□ -1.11
PFDN1-202ENST00000507185 USP45Q70EL2 814 aa8.13□□□□□ -1.11
PFDN1-202ENST00000507185 DENND1CQ8IV53 801 aa8.13□□□□□ -1.11
PFDN1-202ENST00000507185 ELOA2Q8IYF1 753 aaPredicted RBP8.13□□□□□ -1.11
PFDN1-202ENST00000507185 ZBTB44Q8NCP5 570 aa8.13□□□□□ -1.11
PFDN1-202ENST00000507185 RDM1Q8NG50 284 aa8.13□□□□□ -1.11
PFDN1-202ENST00000507185 TCP11Q8WWU5 503 aa8.13□□□□□ -1.11
PFDN1-202ENST00000507185 ZNF512Q96ME7 567 aaPredicted RBP8.13□□□□□ -1.11
PFDN1-202ENST00000507185 TTPALQ9BTX7 342 aa8.13□□□□□ -1.11
PFDN1-202ENST00000507185 BHMT2Q9H2M3 363 aa8.13□□□□□ -1.11
PFDN1-202ENST00000507185 BRD9Q9H8M2 597 aa8.13□□□□□ -1.11
PFDN1-202ENST00000507185 DDX25Q9UHL0 483 aaKnown RBP8.13□□□□□ -1.11
PFDN1-202ENST00000507185 FBXW11Q9UKB1 542 aa8.13□□□□□ -1.11
PFDN1-202ENST00000507185 ANGPTL2Q9UKU9 493 aa8.13□□□□□ -1.11
PFDN1-202ENST00000507185 POLHQ9Y253 713 aa8.13□□□□□ -1.11
PFDN1-202ENST00000507185 FAM227AF5H4B4 570 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 H3BML4 177 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 OVOL3O00110 214 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 SLC30A4O14863 429 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 DKC1O60832 514 aaKnown RBP eCLIP8.12□□□□□ -1.11
PFDN1-202ENST00000507185 PSMD10O75832 226 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 IPO13O94829 963 aaKnown RBP8.12□□□□□ -1.11
PFDN1-202ENST00000507185 PCDH8O95206 1070 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 RETP07949 1114 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 QARSP47897 775 aaKnown RBP8.12□□□□□ -1.11
PFDN1-202ENST00000507185 FAM193AP78312 1265 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 CCT2P78371 535 aaKnown RBP8.12□□□□□ -1.11
PFDN1-202ENST00000507185 CYP4A11Q02928 519 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 DSC1Q08554 894 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 GRIK3Q13003 919 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 SEMA5AQ13591 1074 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 TFDP1Q14186 410 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 CCDC6Q16204 474 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 ESPNLQ6ZVH7 1005 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 MAEAQ7L5Y9 396 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 ACRBPQ8NEB7 543 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 C1GALT1C1Q96EU7 318 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 SGCZQ96LD1 299 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 TBCBQ99426 244 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 NELL2Q99435 816 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 PAAF1Q9BRP4 392 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 LXNQ9BS40 222 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 DDX23Q9BUQ8 820 aaKnown RBP8.12□□□□□ -1.11
PFDN1-202ENST00000507185 B3GNT5Q9BYG0 378 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 PLA2G2FQ9BZM2 168 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 TMEM60Q9H2L4 133 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 LMAN1LQ9HAT1 526 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 SEMA4GQ9NTN9 838 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 USP36Q9P275 1121 aaKnown RBP8.12□□□□□ -1.11
PFDN1-202ENST00000507185 KCNG1Q9UIX4 513 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 DMXL1Q9Y485 3027 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 GPR179Q6PRD1 2367 aa8.12□□□□□ -1.11
PFDN1-202ENST00000507185 COL4A3Q01955 1670 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 CACNA1GO43497 2377 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 EPG5Q9HCE0 2579 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 A0A0A6YYK5 440 aaPredicted RBP8.11□□□□□ -1.11
PFDN1-202ENST00000507185 PRRG1O14668 218 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 ADAM12O43184 909 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 B4GALT5O43286 388 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 MTSS1O43312 755 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 UBXN7O94888 489 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 STBD1O95210 358 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 LPLP06858 475 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 RHOP08100 348 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 CEBPBP17676 345 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 YWHABP31946 246 aaKnown RBP8.11□□□□□ -1.11
PFDN1-202ENST00000507185 ELF1P32519 619 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 OR1D2P34982 312 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 CCR3P51677 355 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 INHBCP55103 352 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 SATB1Q01826 763 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 SPIDRQ14159 915 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 CTTNQ14247 550 aaKnown RBP8.11□□□□□ -1.11
PFDN1-202ENST00000507185 NECTIN1Q15223 517 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 ADCK5Q3MIX3 580 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 Q4G0T1 1027 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 PITRM1Q5JRX3 1037 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 TANGO2Q6ICL3 276 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 OTUD6AQ7L8S5 288 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 RNF168Q8IYW5 571 aaPredicted RBP8.11□□□□□ -1.11
PFDN1-202ENST00000507185 PRR18Q8N4B5 295 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 CELF5Q8N6W0 485 aaKnown RBP8.11□□□□□ -1.11
PFDN1-202ENST00000507185 FAM3CQ92520 227 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 LARP4BQ92615 738 aaKnown RBP8.11□□□□□ -1.11
PFDN1-202ENST00000507185 CCDC51Q96ER9 411 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 CCDC138Q96M89 665 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 CLSTN3Q9BQT9 956 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 SOX7Q9BT81 388 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 IKZF4Q9H2S9 585 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 PRMT8Q9NR22 394 aaPredicted RBP8.11□□□□□ -1.11
PFDN1-202ENST00000507185 DNMT3BQ9UBC3 853 aaKnown RBP8.11□□□□□ -1.11
PFDN1-202ENST00000507185 PIAS3Q9Y6X2 628 aa8.11□□□□□ -1.11
PFDN1-202ENST00000507185 LRRIQ4A6NIV6 560 aa8.1□□□□□ -1.11
PFDN1-202ENST00000507185 GOLGA6L6A8MZA4 724 aa8.1□□□□□ -1.11
PFDN1-202ENST00000507185 I3L4J1 428 aa8.1□□□□□ -1.11
PFDN1-202ENST00000507185 B3GALT2O43825 422 aa8.1□□□□□ -1.11
PFDN1-202ENST00000507185 SLC37A4O43826 429 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms