RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 UNGP13051 313 aaPredicted RBP9.83□□□□□ -0.84
MSH5-218ENST00000494646 MMP8P22894 467 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 CD38P28907 300 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 SCNN1AP37088 669 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 CTSKP43235 329 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 PPP2CBP62714 309 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 PPP2CAP67775 309 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 MYL5Q02045 173 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 NCAPHQ15003 741 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 STX1AQ16623 288 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 CCDC14Q49A88 953 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 CCDC157Q569K6 752 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 ARTNQ5T4W7 220 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 FAM46CQ5VWP2 391 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 DBX2Q6ZNG2 339 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 BNIPLQ7Z465 357 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 PRPF39Q86UA1 669 aaKnown RBP9.83□□□□□ -0.84
MSH5-218ENST00000494646 GATAD2AQ86YP4 633 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 DRC7Q8IY82 874 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 ANKRD20A12PQ8NF67 263 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 SERAC1Q96JX3 654 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 HAPLN3Q96S86 360 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 ACE2Q9BYF1 805 aaPredicted RBP9.83□□□□□ -0.84
MSH5-218ENST00000494646 TNKS2Q9H2K2 1166 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 NDFIP2Q9NV92 336 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 ADAM22Q9P0K1 906 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 ARHGAP20Q9P2F6 1191 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 DNAI1Q9UI46 699 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 VPS51Q9UID3 782 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 PPM1HQ9ULR3 514 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 MSRB2Q9Y3D2 182 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 IGLV3-10A0A075B6K4 115 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 A0A1W2PR77 199 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 C1QTNF3-AMACRE9PGA6 284 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 FAM72CH0Y354 149 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 CBX4O00257 560 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 KPNA3O00505 521 aaPredicted RBP9.82□□□□□ -0.84
MSH5-218ENST00000494646 VILLO15195 856 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 TEX33O43247 280 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 CTSLP07711 333 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 KRT3P12035 628 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 ATP1A3P13637 1013 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 SDC4P31431 198 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 CHRNA3P32297 505 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 RFC1P35251 1148 aaPredicted RBP9.82□□□□□ -0.84
MSH5-218ENST00000494646 ADRA1BP35368 520 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 ACVRL1P37023 503 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 DNA2P51530 1060 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 CCR5P51681 352 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 PTP4A2Q12974 167 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 BNIP3Q12983 259 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 CLEC16AQ2KHT3 1053 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 ZNF423Q2M1K9 1284 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 ARSIQ5FYB1 569 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 C6orf118Q5T5N4 469 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 CCDC183Q5T5S1 534 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 FAM72AQ5TYM5 149 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 FAM72DQ6L9T8 149 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 RWDD4Q6NW29 188 aaKnown RBP9.82□□□□□ -0.84
MSH5-218ENST00000494646 WDR59Q6PJI9 974 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 LEKR1Q6ZMV7 388 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 RAB44Q7Z6P3 723 aaPredicted RBP9.82□□□□□ -0.84
MSH5-218ENST00000494646 DSG4Q86SJ6 1040 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 SETD3Q86TU7 594 aaPredicted RBP9.82□□□□□ -0.84
MSH5-218ENST00000494646 FAM72BQ86X60 149 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 MARCH9Q86YJ5 346 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 AOPEPQ8N6M6 819 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 OR2A12Q8NGT7 310 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 GATA6Q92908 595 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 ARRDC3Q96B67 414 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 SKA1Q96BD8 255 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 AGPAT1Q99943 283 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 C2orf49Q9BVC5 232 aaPredicted RBP9.82□□□□□ -0.84
MSH5-218ENST00000494646 SELENOOQ9BVL4 669 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 TMEM121BQ9BXQ6 578 aaPredicted RBP9.82□□□□□ -0.84
MSH5-218ENST00000494646 ZYG11BQ9C0D3 744 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 HSD3B7Q9H2F3 369 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 ATP13A1Q9HD20 1204 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 TMEM63CQ9P1W3 806 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 OR12D3Q9UGF7 316 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 ZMIZ1Q9ULJ6 1067 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 APOBEC2Q9Y235 224 aaKnown RBP9.82□□□□□ -0.84
MSH5-218ENST00000494646 CA5BQ9Y2D0 317 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 FARP1Q9Y4F1 1045 aaPredicted RBP9.82□□□□□ -0.84
MSH5-218ENST00000494646 NEUROG3Q9Y4Z2 214 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 PCDHGB2Q9Y5G2 931 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 CHD5Q8TDI0 1954 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 IGF2RP11717 2491 aa9.82□□□□□ -0.84
MSH5-218ENST00000494646 DSPP15924 2871 aaKnown RBP9.81□□□□□ -0.84
MSH5-218ENST00000494646 ARID1BQ8NFD5 2236 aaPredicted RBP9.81□□□□□ -0.84
MSH5-218ENST00000494646 A0A1B0GTQ1 180 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 ILVBLA1L0T0 632 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 C2CD4BA6NLJ0 364 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 LGALS16A8MUM7 142 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 TMCO5BA8MYB1 307 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 TLR4O00206 839 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 SLC31A1O15431 190 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 FLRT2O43155 660 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 PLRG1O43660 514 aaKnown RBP9.81□□□□□ -0.84
MSH5-218ENST00000494646 RNGTTO60942 597 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms