RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 RFX6Q8HWS3 928 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 PQLC3Q8N755 202 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 CCDC114Q96M63 670 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 IRF2BPLQ9H1B7 796 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 SP110Q9HB58 689 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 ETNK2Q9NVF9 386 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 EBF1Q9UH73 591 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 SLCO3A1Q9UIG8 710 aa16.3■□□□□ 0.2
HDAC7-224ENST00000488927 K7ESF4 209 aa16.29■□□□□ 0.2
HDAC7-224ENST00000488927 PRAMEF11O60813 436 aa16.29■□□□□ 0.2
HDAC7-224ENST00000488927 SRCP12931 536 aa16.29■□□□□ 0.2
HDAC7-224ENST00000488927 GLDCP23378 1020 aa16.29■□□□□ 0.2
HDAC7-224ENST00000488927 PTPN7P35236 360 aa16.29■□□□□ 0.2
HDAC7-224ENST00000488927 CSTF1Q05048 431 aaKnown RBP16.29■□□□□ 0.2
HDAC7-224ENST00000488927 IL10RBQ08334 325 aa16.29■□□□□ 0.2
HDAC7-224ENST00000488927 RFTN1Q14699 578 aaPredicted RBP16.29■□□□□ 0.2
HDAC7-224ENST00000488927 DLG2Q15700 870 aa16.29■□□□□ 0.2
HDAC7-224ENST00000488927 ACCSLQ4AC99 568 aa16.29■□□□□ 0.2
HDAC7-224ENST00000488927 TMCO4Q5TGY1 634 aa16.29■□□□□ 0.2
HDAC7-224ENST00000488927 MEI1Q5TIA1 1274 aa16.29■□□□□ 0.2
HDAC7-224ENST00000488927 REXO1L1PQ8IX06 675 aa16.29■□□□□ 0.2
HDAC7-224ENST00000488927 ATPAF2Q8N5M1 289 aa16.29■□□□□ 0.2
HDAC7-224ENST00000488927 ISG20Q96AZ6 181 aaKnown RBP16.29■□□□□ 0.2
HDAC7-224ENST00000488927 C2orf42Q9NWW7 574 aa16.29■□□□□ 0.2
HDAC7-224ENST00000488927 FARP1Q9Y4F1 1045 aaPredicted RBP16.29■□□□□ 0.2
HDAC7-224ENST00000488927 KMT2EQ8IZD2 1858 aa16.29■□□□□ 0.2
HDAC7-224ENST00000488927 hCG_1818297A0A087WSY0 165 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 TCRBV21S2A2A0A5A6 115 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 TTC34A8MYJ7 566 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 MFSD11O43934 449 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 KIF5CO60282 957 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 RNASEH1O60930 286 aaKnown RBP16.28■□□□□ 0.2
HDAC7-224ENST00000488927 MT-CO1P00395 513 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 HLA-EP13747 358 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 TGM2P21980 687 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 RECQLP46063 649 aaPredicted RBP16.28■□□□□ 0.2
HDAC7-224ENST00000488927 NR2C2P49116 596 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 NUMBP49757 651 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 GALNT2Q10471 571 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 ELAVL3Q14576 367 aaKnown RBP16.28■□□□□ 0.2
HDAC7-224ENST00000488927 RPS6KA1Q15418 735 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 LINGO4Q6UY18 593 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 MAML2Q8IZL2 1156 aaPredicted RBP16.28■□□□□ 0.2
HDAC7-224ENST00000488927 PCDH20Q8N6Y1 951 aaKnown RBP16.28■□□□□ 0.2
HDAC7-224ENST00000488927 PLD5Q8N7P1 536 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 OR2T3Q8NH03 318 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 FRS2Q8WU20 508 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 NSMCE1Q8WV22 266 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 ALG3Q92685 438 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 ZNF599Q96NL3 588 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 HHIPQ96QV1 700 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 CD248Q9HCU0 757 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 PRSS16Q9NQE7 514 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 TRMT1Q9NXH9 659 aaKnown RBP16.28■□□□□ 0.2
HDAC7-224ENST00000488927 UBA2Q9UBT2 640 aaPredicted RBP16.28■□□□□ 0.2
HDAC7-224ENST00000488927 IPO11Q9UI26 975 aaKnown RBP16.28■□□□□ 0.2
HDAC7-224ENST00000488927 PACSIN2Q9UNF0 486 aaPredicted RBP16.28■□□□□ 0.2
HDAC7-224ENST00000488927 MFHAS1Q9Y4C4 1052 aa16.28■□□□□ 0.2
HDAC7-224ENST00000488927 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.28■□□□□ 0.2
HDAC7-224ENST00000488927 ALOX15BO15296 676 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 DDX3YO15523 660 aaKnown RBP16.27■□□□□ 0.2
HDAC7-224ENST00000488927 CST8O60676 142 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 COL9A1P20849 921 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 GARSP41250 739 aaKnown RBP16.27■□□□□ 0.2
HDAC7-224ENST00000488927 ZBTB16Q05516 673 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 ZNF33AQ06730 810 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 PDK1Q15118 436 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 C9orf64Q5T6V5 341 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 TIGD7Q6NT04 549 aaPredicted RBP16.27■□□□□ 0.2
HDAC7-224ENST00000488927 KIAA1211LQ6NV74 962 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 C22orf39Q6P5X5 142 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 DSG4Q86SJ6 1040 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 RASSF3Q86WH2 238 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 PLPP6Q8IY26 295 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 BBS5Q8N3I7 341 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 ZNF366Q8N895 744 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 PTPRN2Q92932 1015 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 BRD8Q9H0E9 1235 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 PDFQ9HBH1 243 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 HAUS2Q9NVX0 235 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 BCCIPQ9P287 314 aaKnown RBP eCLIP16.27■□□□□ 0.2
HDAC7-224ENST00000488927 PYCARDQ9ULZ3 195 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 HCN4Q9Y3Q4 1203 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 JRKLQ9Y4A0 524 aa16.27■□□□□ 0.2
HDAC7-224ENST00000488927 MUC22E2RYF6 1773 aaPredicted RBP16.27■□□□□ 0.2
HDAC7-224ENST00000488927 K7ERQ8 282 aa16.26■□□□□ 0.19
HDAC7-224ENST00000488927 PPP1R12AO14974 1030 aaPredicted RBP16.26■□□□□ 0.19
HDAC7-224ENST00000488927 MAFKO60675 156 aa16.26■□□□□ 0.19
HDAC7-224ENST00000488927 SIN3BO75182 1162 aa16.26■□□□□ 0.19
HDAC7-224ENST00000488927 TJP3O95049 919 aa16.26■□□□□ 0.19
HDAC7-224ENST00000488927 CD160O95971 181 aa16.26■□□□□ 0.19
HDAC7-224ENST00000488927 C7P10643 843 aa16.26■□□□□ 0.19
HDAC7-224ENST00000488927 PYGMP11217 842 aa16.26■□□□□ 0.19
HDAC7-224ENST00000488927 TDGF1P13385 188 aa16.26■□□□□ 0.19
HDAC7-224ENST00000488927 KRT10P13645 584 aa16.26■□□□□ 0.19
HDAC7-224ENST00000488927 DYNLT1P63172 113 aa16.26■□□□□ 0.19
HDAC7-224ENST00000488927 GBE1Q04446 702 aa16.26■□□□□ 0.19
HDAC7-224ENST00000488927 SFSWAPQ12872 951 aaKnown RBP16.26■□□□□ 0.19
HDAC7-224ENST00000488927 BYSLQ13895 437 aaKnown RBP16.26■□□□□ 0.19
HDAC7-224ENST00000488927 KAZNQ674X7 775 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms