RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 CDO1Q16878 200 aa23.64■■□□□ 1.37
CUL4A-209ENST00000488558 RETSATQ6NUM9 610 aa23.64■■□□□ 1.37
CUL4A-209ENST00000488558 MON1BQ7L1V2 547 aa23.64■■□□□ 1.37
CUL4A-209ENST00000488558 RAB44Q7Z6P3 723 aaPredicted RBP23.64■■□□□ 1.37
CUL4A-209ENST00000488558 TRIM69Q86WT6 500 aa23.64■■□□□ 1.37
CUL4A-209ENST00000488558 OR2A12Q8NGT7 310 aa23.64■■□□□ 1.37
CUL4A-209ENST00000488558 SETD7Q8WTS6 366 aaKnown RBP23.64■■□□□ 1.37
CUL4A-209ENST00000488558 NTAN1Q96AB6 310 aa23.64■■□□□ 1.37
CUL4A-209ENST00000488558 CEP44Q9C0F1 390 aa23.64■■□□□ 1.37
CUL4A-209ENST00000488558 OR12D3Q9UGF7 316 aa23.64■■□□□ 1.37
CUL4A-209ENST00000488558 MYO6Q9UM54 1294 aa23.64■■□□□ 1.37
CUL4A-209ENST00000488558 TBC1D3DA0A087WVF3 549 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 TBC1D3IA0A087WXS9 549 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 TBC1D3EA0A087X179 549 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 TBC1D3KA0A087X1G2 549 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 FAM221BA6H8Z2 402 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 TBC1D3FA6NER0 549 aaPredicted RBP23.63■■□□□ 1.37
CUL4A-209ENST00000488558 TBC1D3LB9A6J9 549 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 HYAL3O43820 417 aaPredicted RBP23.63■■□□□ 1.37
CUL4A-209ENST00000488558 TBC1D3HP0C7X1 549 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 FTH1P19P0C7X4 201 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 ATP1A3P13637 1013 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 FERP16591 822 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 SPINK2P20155 84 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 CD38P28907 300 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 ETFBP38117 255 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 PPP2CBP62714 309 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 PPP2CAP67775 309 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 GNA12Q03113 381 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 SLC20A2Q08357 652 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 CNTN1Q12860 1018 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 ANO6Q4KMQ2 910 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 KCNT1Q5JUK3 1230 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 TBC1D3GQ6DHY5 549 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 TBC1D3CQ6IPX1 549 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 C22orf39Q6P5X5 142 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 TBC1D3Q8IZP1 549 aaPredicted RBP23.63■■□□□ 1.37
CUL4A-209ENST00000488558 TMIEQ8NEW7 156 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 OR7D4Q8NG98 312 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 CDC6Q99741 560 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 AGPAT1Q99943 283 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 SELENOOQ9BVL4 669 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 PREBQ9HCU5 417 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 DMTF1Q9Y222 760 aa23.63■■□□□ 1.37
CUL4A-209ENST00000488558 A0A1W2PR77 199 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 TMEM8BA6NDV4 472 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 H0Y8X5 98 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 K7ERQ8 282 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 SMAD6O43541 496 aaKnown RBP23.62■■□□□ 1.37
CUL4A-209ENST00000488558 RTN2O75298 545 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 ZMPSTE24O75844 475 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 PRNPP04156 253 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 RHOQP17081 205 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 GPD1P21695 349 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 RRM1P23921 792 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 CHRNA3P32297 505 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 RFC1P35251 1148 aaPredicted RBP23.62■■□□□ 1.37
CUL4A-209ENST00000488558 MAPKAPK2P49137 400 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 SERPINH1P50454 418 aaKnown RBP23.62■■□□□ 1.37
CUL4A-209ENST00000488558 HDAC4P56524 1084 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 CCDC15Q0P6D6 951 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 SCAPQ12770 1279 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 RAB6CQ53S08 254 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 SLC45A4Q5BKX6 768 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 NAPEPLDQ6IQ20 393 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 PHLDB2Q86SQ0 1253 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 PRPF39Q86UA1 669 aaKnown RBP23.62■■□□□ 1.37
CUL4A-209ENST00000488558 FAM172AQ8WUF8 416 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 ADAMTS14Q8WXS8 1223 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 GATA6Q92908 595 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 SERAC1Q96JX3 654 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 RAB6CQ9H0N0 254 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 ATP13A1Q9HD20 1204 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 AASDHPPTQ9NRN7 309 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 NEU3Q9UQ49 428 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 APOBEC2Q9Y235 224 aaKnown RBP23.62■■□□□ 1.37
CUL4A-209ENST00000488558 MSRB2Q9Y3D2 182 aa23.62■■□□□ 1.37
CUL4A-209ENST00000488558 COL5A1P20908 1838 aaPredicted RBP23.61■■□□□ 1.37
CUL4A-209ENST00000488558 A0A1B0GTQ1 180 aa23.61■■□□□ 1.37
CUL4A-209ENST00000488558 TCRBV5S1A1TA0A578 114 aa23.61■■□□□ 1.37
CUL4A-209ENST00000488558 SIGLEC16A6NMB1 481 aa23.61■■□□□ 1.37
CUL4A-209ENST00000488558 CBX4O00257 560 aa23.61■■□□□ 1.37
CUL4A-209ENST00000488558 GJB6O95452 261 aa23.61■■□□□ 1.37
CUL4A-209ENST00000488558 WNT1P04628 370 aa23.61■■□□□ 1.37
CUL4A-209ENST00000488558 CTSLP07711 333 aa23.61■■□□□ 1.37
CUL4A-209ENST00000488558 GRK6P43250 576 aa23.61■■□□□ 1.37
CUL4A-209ENST00000488558 INAVAQ3KP66 663 aa23.61■■□□□ 1.37
CUL4A-209ENST00000488558 PIP5KL1Q5T9C9 394 aa23.61■■□□□ 1.37
CUL4A-209ENST00000488558 PPP1R2P3Q6NXS1 205 aa23.61■■□□□ 1.37
CUL4A-209ENST00000488558 LINGO4Q6UY18 593 aa23.61■■□□□ 1.37
CUL4A-209ENST00000488558 NLRP14Q86W24 1093 aa23.61■■□□□ 1.37
CUL4A-209ENST00000488558 SEPT11Q9NVA2 429 aaKnown RBP23.61■■□□□ 1.37
CUL4A-209ENST00000488558 TMEM248Q9NWD8 314 aa23.61■■□□□ 1.37
CUL4A-209ENST00000488558 ARHGAP20Q9P2F6 1191 aa23.61■■□□□ 1.37
CUL4A-209ENST00000488558 FRYQ5TBA9 3013 aa23.61■■□□□ 1.37
CUL4A-209ENST00000488558 SMTNL1A8MU46 457 aa23.6■■□□□ 1.37
CUL4A-209ENST00000488558 C1QTNF9BB2RNN3 333 aa23.6■■□□□ 1.37
CUL4A-209ENST00000488558 PLK4O00444 970 aa23.6■■□□□ 1.37
CUL4A-209ENST00000488558 YKT6O15498 198 aa23.6■■□□□ 1.37
CUL4A-209ENST00000488558 BNIP3LO60238 219 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms