RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 VWA3BQ502W6 1294 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 SETMARQ53H47 684 aaPredicted RBP19.71■□□□□ 0.75
COL27A1-205ENST00000485397 SOWAHCQ53LP3 525 aaPredicted RBP19.71■□□□□ 0.75
COL27A1-205ENST00000485397 HSP90AA4PQ58FG1 418 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 MIIPQ5JXC2 388 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 LINGO4Q6UY18 593 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 CHST14Q8NCH0 376 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 TMEM35BQ8NCS4 154 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 OR2A12Q8NGT7 310 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 NT5C3BQ969T7 300 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 LRIG1Q96JA1 1093 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 NDST4Q9H3R1 872 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 PREBQ9HCU5 417 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 A0A1W2PQU0 124 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 E9PAM4 449 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 KPNA3O00505 521 aaPredicted RBP19.7■□□□□ 0.74
COL27A1-205ENST00000485397 SLC31A1O15431 190 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 MAGEC1O60732 1142 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 PRKCSHP14314 528 aaPredicted RBP19.7■□□□□ 0.74
COL27A1-205ENST00000485397 CYP11B1P15538 503 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 PRLRP16471 622 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 GLDCP23378 1020 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 CDH5P33151 784 aaPredicted RBP19.7■□□□□ 0.74
COL27A1-205ENST00000485397 GABRB2P47870 512 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 BPIFB4P59827 614 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 KCNMA1Q12791 1236 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 OVGP1Q12889 678 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 RAPGEF1Q13905 1077 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 C2CD6Q53TS8 623 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 FAM102AQ5T9C2 384 aaPredicted RBP19.7■□□□□ 0.74
COL27A1-205ENST00000485397 HES3Q5TGS1 186 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 TAF3Q5VWG9 929 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 TFAP2DQ7Z6R9 452 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 OR7D4Q8NG98 312 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 C18orf8Q96DM3 657 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 PGAP3Q96FM1 320 aaPredicted RBP19.7■□□□□ 0.74
COL27A1-205ENST00000485397 KLHDC7BQ96G42 594 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 C2orf49Q9BVC5 232 aaPredicted RBP19.7■□□□□ 0.74
COL27A1-205ENST00000485397 FARP1Q9Y4F1 1045 aaPredicted RBP19.7■□□□□ 0.74
COL27A1-205ENST00000485397 FHOD1Q9Y613 1164 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 LAMA5O15230 3695 aa19.7■□□□□ 0.74
COL27A1-205ENST00000485397 ARID1BQ8NFD5 2236 aaPredicted RBP19.7■□□□□ 0.74
COL27A1-205ENST00000485397 F9P00740 461 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 CDK4P11802 303 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 HNF1BP35680 557 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 FLT3P36888 993 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 TARDBPQ13148 414 aaKnown RBP eCLIP19.69■□□□□ 0.74
COL27A1-205ENST00000485397 SLC25A52Q3SY17 297 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 ARTNQ5T4W7 220 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 TRNP1Q6NT89 227 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 FBXL19Q6PCT2 694 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 LRRC31Q6UY01 552 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 SETD3Q86TU7 594 aaPredicted RBP19.69■□□□□ 0.74
COL27A1-205ENST00000485397 ERICH1Q86X53 443 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 XYLT1Q86Y38 959 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 DCAF4L2Q8NA75 395 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 TMEM145Q8NBT3 493 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 TMIEQ8NEW7 156 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 CRELD1Q96HD1 420 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 TUBGCP2Q9BSJ2 902 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 TNKS2Q9H2K2 1166 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 CAAP1Q9H8G2 361 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 FZD3Q9NPG1 666 aa19.69■□□□□ 0.74
COL27A1-205ENST00000485397 A0A087WV48 116 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 GOLGA8SH3BPF8 625 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 TRIM38O00635 465 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 SRGAP2O75044 1071 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 ENDOD1O94919 500 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 THEGLP0DJG4 465 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 CKMT2P17540 419 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 ARSIQ5FYB1 569 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 C6orf118Q5T5N4 469 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 KLHDC7AQ5VTJ3 777 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 C22orf39Q6P5X5 142 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 HORMAD1Q86X24 394 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 FAM114A1Q8IWE2 563 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 SLC25A45Q8N413 288 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 GRIN3AQ8TCU5 1115 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 C1orf74Q96LT6 269 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 CCDC114Q96M63 670 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 DCBLD2Q96PD2 775 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 SPON2Q9BUD6 331 aa19.68■□□□□ 0.74
COL27A1-205ENST00000485397 CELSR3Q9NYQ7 3312 aa19.67■□□□□ 0.74
COL27A1-205ENST00000485397 BAHCC1Q9P281 2608 aa19.67■□□□□ 0.74
COL27A1-205ENST00000485397 IGLV3-10A0A075B6K4 115 aa19.67■□□□□ 0.74
COL27A1-205ENST00000485397 SIGLEC6O43699 453 aa19.67■□□□□ 0.74
COL27A1-205ENST00000485397 PRNPP04156 253 aa19.67■□□□□ 0.74
COL27A1-205ENST00000485397 OR1E1P30953 314 aa19.67■□□□□ 0.74
COL27A1-205ENST00000485397 SCNN1AP37088 669 aa19.67■□□□□ 0.74
COL27A1-205ENST00000485397 CLCN6P51797 869 aa19.67■□□□□ 0.74
COL27A1-205ENST00000485397 ZNF284Q2VY69 593 aa19.67■□□□□ 0.74
COL27A1-205ENST00000485397 PROX2Q3B8N5 592 aa19.67■□□□□ 0.74
COL27A1-205ENST00000485397 DPCR1Q3MIW9 517 aa19.67■□□□□ 0.74
COL27A1-205ENST00000485397 NEK5Q6P3R8 708 aa19.67■□□□□ 0.74
COL27A1-205ENST00000485397 DPY19L3Q6ZPD9 716 aa19.67■□□□□ 0.74
COL27A1-205ENST00000485397 NOP9Q86U38 636 aaKnown RBP19.67■□□□□ 0.74
COL27A1-205ENST00000485397 NXPE2Q96DL1 559 aa19.67■□□□□ 0.74
COL27A1-205ENST00000485397 DYRK4Q9NR20 520 aa19.67■□□□□ 0.74
COL27A1-205ENST00000485397 ZFR2Q9UPR6 939 aaKnown RBP19.67■□□□□ 0.74
COL27A1-205ENST00000485397 PAXBP1Q9Y5B6 917 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms