RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 IL23AQ9NPF7 189 aa3.65□□□□□ -1.83
FNDC3B-209ENST00000478016 CCM2LQ9NUG4 571 aaPredicted RBP3.65□□□□□ -1.83
FNDC3B-209ENST00000478016 DECR2Q9NUI1 292 aa3.65□□□□□ -1.83
FNDC3B-209ENST00000478016 DNAJC28Q9NX36 388 aa3.65□□□□□ -1.83
FNDC3B-209ENST00000478016 SMPD4Q9NXE4 827 aa3.65□□□□□ -1.83
FNDC3B-209ENST00000478016 NINJ2Q9NZG7 142 aa3.65□□□□□ -1.83
FNDC3B-209ENST00000478016 ANAPC5Q9UJX4 755 aa3.65□□□□□ -1.83
FNDC3B-209ENST00000478016 ZFR2Q9UPR6 939 aaKnown RBP3.65□□□□□ -1.83
FNDC3B-209ENST00000478016 PCDHGB6Q9Y5F9 930 aa3.65□□□□□ -1.83
FNDC3B-209ENST00000478016 PCDHGA9Q9Y5G4 932 aaKnown RBP3.65□□□□□ -1.83
FNDC3B-209ENST00000478016 PCDHGA8Q9Y5G5 932 aa3.65□□□□□ -1.83
FNDC3B-209ENST00000478016 PCDHGA7Q9Y5G6 932 aa3.65□□□□□ -1.83
FNDC3B-209ENST00000478016 PCDHGA6Q9Y5G7 932 aa3.65□□□□□ -1.83
FNDC3B-209ENST00000478016 PCDHGA3Q9Y5H0 932 aa3.65□□□□□ -1.83
FNDC3B-209ENST00000478016 PCDHGA2Q9Y5H1 932 aa3.65□□□□□ -1.83
FNDC3B-209ENST00000478016 SPATA31A3Q5VYP0 1347 aa3.65□□□□□ -1.83
FNDC3B-209ENST00000478016 PREX1Q8TCU6 1659 aa3.65□□□□□ -1.83
FNDC3B-209ENST00000478016 ROCK1Q13464 1354 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 KDM5CP41229 1560 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 FMN1Q68DA7 1419 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 RNF103-CHMP3A0A140T963 221 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 hCG_1807616A0A1W2PRN6 198 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 LRRD1A4D1F6 860 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 A8MXE2 369 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 ZNF879B4DU55 563 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 EIF3CLB5ME19 914 aaKnown RBP3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 H3BML4 177 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 RNF103O00237 685 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 PSMD14O00487 310 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 NRP1O14786 923 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 PSMA7O14818 248 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 PGRMC2O15173 223 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 IDH3BO43837 385 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 ZNF623O75123 536 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 CRTAPO75718 401 aaPredicted RBP3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 CBR3O75828 277 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 KLHL2O95198 593 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 MT-CO1P00395 513 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 KRT14P02533 472 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 ANXA6P08133 673 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 SERPINF2P08697 491 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 PRR35P0CG20 571 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 C6P13671 934 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 ALOX15P16050 662 aaPredicted RBP3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 GCFC2P16383 781 aaKnown RBP3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 CCNA2P20248 432 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 PDCP20941 246 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 CCR1P32246 355 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 BMI1P35226 326 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 PTGS2P35354 604 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 CBX5P45973 191 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 DHPSP49366 369 aaPredicted RBP3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 RGS19P49795 217 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 MRPL12P52815 198 aaKnown RBP3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 SLC5A3P53794 718 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 CASP6P55212 293 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 WNT3AP56704 352 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 CARD18P57730 90 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 ARF3P61204 181 aaPredicted RBP3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 POLR2GP62487 172 aaKnown RBP eCLIP3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 CSNK2BP67870 215 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 ADAM8P78325 824 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 ARF1P84077 181 aaKnown RBP3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 SRSF2Q01130 221 aaKnown RBP3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 NIPAL4Q0D2K0 466 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 EFEMP1Q12805 493 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 FSTL1Q12841 308 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 CAMK2DQ13557 499 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 BMPR2Q13873 1038 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 HABP2Q14520 560 aaPredicted RBP3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 ICAM4Q14773 271 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 TYSND1Q2T9J0 566 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 LETM2Q2VYF4 491 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 HS1BP3Q53T59 392 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 TCP11X2Q5H9J9 407 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 TOR2AQ5JU69 321 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 LIN9Q5TKA1 542 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 TBC1D9BQ66K14 1250 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 TANGO2Q6ICL3 276 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 JMJD6Q6NYC1 403 aaPredicted RBP3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 FAM171BQ6P995 826 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 SLC2A7Q6PXP3 512 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 METAP1DQ6UB28 335 aaPredicted RBP3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 TMTC3Q6ZXV5 915 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 TAS1R1Q7RTX1 841 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 KCNK18Q7Z418 384 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 POLNQ7Z5Q5 900 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 RABEPKQ7Z6M1 372 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 PSTKQ8IV42 348 aaKnown RBP3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 SLC22A9Q8IVM8 553 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 MFN1Q8IWA4 741 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 WDR63Q8IWG1 891 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 ZFPM1Q8IX07 1006 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 FUKQ8N0W3 1084 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 FBXW8Q8N3Y1 598 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 AOPEPQ8N6M6 819 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 ZNF527Q8NB42 609 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 PIK3C3Q8NEB9 887 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 B4GALNT2Q8NHY0 566 aa3.64□□□□□ -1.83
FNDC3B-209ENST00000478016 ZNF461Q8TAF7 563 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms