RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 BRD2P25440 801 aaKnown RBP20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 RPL34P49207 117 aaKnown RBP20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 TMEM259Q4ZIN3 620 aa20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 RABGAP1LQ5R372 815 aa20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 C6orf132Q5T0Z8 1188 aa20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 TCERG1LQ5VWI1 586 aa20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 SYPL2Q5VXT5 272 aa20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 XKR5Q6UX68 686 aa20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 KYAT3Q6YP21 454 aaKnown RBP20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 Q6ZSR6 202 aa20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 SH2D3CQ8N5H7 860 aa20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 WDR36Q8NI36 951 aaKnown RBP20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 ARRDC3Q96B67 414 aa20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 STARD5Q9NSY2 213 aa20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 ZFR2Q9UPR6 939 aaKnown RBP20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 LRRK2Q5S007 2527 aa20.78■□□□□ 0.92
PDLIM1-202ENST00000477757 CPED1A4D0V7 1026 aa20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 EME2A4GXA9 379 aaPredicted RBP20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 H3BM21 787 aa20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 CSF2P04141 144 aa20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 ITGA2BP08514 1039 aa20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 PDX1P52945 283 aa20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 CCDC15Q0P6D6 951 aa20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 DPYDQ12882 1025 aa20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 FZD2Q14332 565 aa20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 LINC00303Q3SY05 128 aa20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 ATL3Q6DD88 541 aa20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 OR6B2Q6IFH4 312 aa20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 ATG14Q6ZNE5 492 aa20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 PARGQ86W56 976 aa20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 ATP6V0D2Q8N8Y2 350 aa20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 PPP1R9BQ96SB3 815 aa20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 FEM1AQ9BSK4 669 aa20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.77■□□□□ 0.92
PDLIM1-202ENST00000477757 SPTY2D1-AS1A0A0U1RR47 76 aa20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 A0A1B0GVL5 298 aa20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 KCNU1A8MYU2 1149 aa20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 KPNA3O00505 521 aaPredicted RBP20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 CETN3O15182 167 aa20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 BNIP3LO60238 219 aa20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 TNFSF15O95150 251 aa20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 CENPBP07199 599 aaPredicted RBP20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 LRMPQ12912 555 aa20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 COLEC12Q5KU26 742 aa20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 SEL1L3Q68CR1 1132 aa20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 FOXR1Q6PIV2 292 aa20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 OR52K2Q8NGK3 314 aa20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 SALL4Q9UJQ4 1053 aa20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 VPS28Q9UK41 221 aa20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 HPSEQ9Y251 543 aa20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 HS3ST2Q9Y278 367 aa20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 OR51B4Q9Y5P0 310 aa20.76■□□□□ 0.91
PDLIM1-202ENST00000477757 CCDC187A0A096LP49 1063 aa20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 SLC16A3O15427 465 aaKnown RBP20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 EFSO43281 561 aa20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 AQP9O43315 295 aa20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 TRUB2O95900 331 aaKnown RBP20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 F13A1P00488 732 aa20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 CENPCQ03188 943 aa20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 EIF4EBP2Q13542 120 aaPredicted RBP20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 NR0B2Q15466 257 aa20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 CRTC1Q6UUV9 634 aa20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 TMIEQ8NEW7 156 aa20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 OR2A12Q8NGT7 310 aa20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 RNF34Q969K3 372 aa20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 BMFQ96LC9 184 aa20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 CCDC114Q96M63 670 aa20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 RCOR1Q9UKL0 485 aa20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 CFAP45Q9UL16 551 aa20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 PCDHB4Q9Y5E5 795 aa20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 HS3ST3A1Q9Y663 406 aa20.75■□□□□ 0.91
PDLIM1-202ENST00000477757 KIF26BQ2KJY2 2108 aa20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 DOPEY2Q9Y3R5 2298 aa20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 K7ELQ4 463 aaPredicted RBP20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 RNF225M0QZC1 329 aaPredicted RBP20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 PCDH8O95206 1070 aa20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 ITGB2P05107 769 aa20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 ZSCAN22P10073 491 aaPredicted RBP20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 SRCP12931 536 aa20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 CMA1P23946 247 aa20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 CHRNA3P32297 505 aa20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 DEFB133Q30KQ1 61 aa20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 PERM1Q5SV97 790 aa20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 FBXL22Q6P050 247 aa20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 ERN2Q76MJ5 926 aaKnown RBP20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 WDR48Q8TAF3 677 aa20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 RPRD1AQ96P16 312 aaPredicted RBP20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 HDAC8Q9BY41 377 aa20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 POPDC2Q9HBU9 364 aa20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 DYRK4Q9NR20 520 aa20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 ST7Q9NRC1 585 aa20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 SLC12A6Q9UHW9 1150 aa20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 FARP1Q9Y4F1 1045 aaPredicted RBP20.74■□□□□ 0.91
PDLIM1-202ENST00000477757 POM121BA6NF01 834 aa20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 TPP1O14773 563 aa20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 CALCAP01258 141 aa20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 PRNPP04156 253 aa20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 NTRK1P04629 796 aa20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 ITGB6P18564 788 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms