RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 ANKRD6Q9Y2G4 727 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 SF3B1O75533 1304 aaKnown RBP eCLIP18.84■□□□□ 0.612e-6■■■■■ 86.3
VARS2-209ENST00000477288 LGALS2P05162 132 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 COPZ1P61923 177 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 TCEAL5Q5H9L2 206 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 PAGE2BQ5JRK9 111 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 PRCCQ92733 491 aaPredicted RBP18.84■□□□□ 0.61
VARS2-209ENST00000477288 LENG9Q96B70 501 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 STARD13Q9Y3M8 1113 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 IL12RB1P42701 662 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 GSTM5P46439 218 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 PPATQ06203 517 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 ELMO1Q92556 727 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 AASDHPPTQ9NRN7 309 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 ZNHIT2Q9UHR6 403 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 RXRGP48443 463 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 KIAA0408Q6ZU52 694 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 MPP4Q96JB8 637 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 PNMA5Q96PV4 448 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 SEMA4BQ9NPR2 832 aaPredicted RBP18.84■□□□□ 0.61
VARS2-209ENST00000477288 TPRKBQ9Y3C4 175 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 EPN2O95208 641 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 OAZ1P54368 228 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 PFKPQ01813 784 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 ZCCHC23Q6ZST2 131 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 TCP10LQ8TDR4 215 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 COPG2Q9UBF2 871 aa18.84■□□□□ 0.61
VARS2-209ENST00000477288 CCL23P55773 120 aa18.83■□□□□ 0.61
VARS2-209ENST00000477288 PEG10Q86TG7 708 aaKnown RBP18.83■□□□□ 0.61
VARS2-209ENST00000477288 SLC9A7Q96T83 725 aa18.83■□□□□ 0.61
VARS2-209ENST00000477288 PAIP1Q9H074 479 aaKnown RBP18.83■□□□□ 0.61
VARS2-209ENST00000477288 FAM86B1E9PN63 330 aa18.83■□□□□ 0.61
VARS2-209ENST00000477288 GUCY1B2O75343 617 aa18.83■□□□□ 0.61
VARS2-209ENST00000477288 SLITRK3O94933 977 aa18.83■□□□□ 0.61
VARS2-209ENST00000477288 MYBPC2Q14324 1141 aa18.83■□□□□ 0.61
VARS2-209ENST00000477288 MIIPQ5JXC2 388 aa18.83■□□□□ 0.61
VARS2-209ENST00000477288 RAP1GAP2Q684P5 730 aa18.83■□□□□ 0.61
VARS2-209ENST00000477288 RAET1GQ6H3X3 334 aa18.83■□□□□ 0.61
VARS2-209ENST00000477288 TMEM86AQ8N2M4 240 aa18.83■□□□□ 0.61
VARS2-209ENST00000477288 APBB2Q92870 758 aa18.83■□□□□ 0.61
VARS2-209ENST00000477288 CXorf40BQ96DE9 158 aa18.83■□□□□ 0.61
VARS2-209ENST00000477288 ELL3Q9HB65 397 aaPredicted RBP18.83■□□□□ 0.61
VARS2-209ENST00000477288 E5RJQ4 531 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 UQCRBP14927 111 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 CLVS1Q8IUQ0 354 aaPredicted RBP18.83■□□□□ 0.6
VARS2-209ENST00000477288 SETD9Q8NE22 299 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 OR6Y1Q8NGX8 325 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 ANKRD7Q92527 254 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 FAM126AQ9BYI3 521 aaPredicted RBP18.83■□□□□ 0.6
VARS2-209ENST00000477288 FAM50BQ9Y247 325 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 SLC9A3R1O14745 358 aaPredicted RBP18.83■□□□□ 0.6
VARS2-209ENST00000477288 CYP1A1P04798 512 aaPredicted RBP18.83■□□□□ 0.6
VARS2-209ENST00000477288 ITGA1P56199 1179 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 PRAMEF19Q5SWL8 479 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 PMF1Q6P1K2 205 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 CXCL17Q6UXB2 119 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 RXFP1Q9HBX9 757 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 ASAH2Q9NR71 780 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 USP12O75317 370 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 GJB6O95452 261 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 FGFR3P22607 806 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 DGKAP23743 735 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 ISLR2Q6UXK2 745 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 KRT74Q7RTS7 529 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 DSELQ8IZU8 1212 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 ENOPH1Q9UHY7 261 aa18.83■□□□□ 0.6
VARS2-209ENST00000477288 MRPS23Q9Y3D9 190 aaKnown RBP18.83■□□□□ 0.6
VARS2-209ENST00000477288 MFN2O95140 757 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 PAEPP09466 180 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 ACSM2AQ08AH3 577 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 ACSM2BQ68CK6 577 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 BRSK2Q8IWQ3 736 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 HACD1B0YJ81 288 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 HMGCRP04035 888 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 GPR1P46091 355 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 ARF5P84085 180 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 KCNT2Q6UVM3 1135 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 CDH24Q86UP0 819 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 IPCEF1Q8WWN9 437 aaPredicted RBP18.82■□□□□ 0.6
VARS2-209ENST00000477288 TLX1P31314 330 aaPredicted RBP18.82■□□□□ 0.6
VARS2-209ENST00000477288 EIF2B2P49770 351 aaKnown RBP18.82■□□□□ 0.6
VARS2-209ENST00000477288 OXNAD1Q96HP4 312 aaPredicted RBP18.82■□□□□ 0.6
VARS2-209ENST00000477288 TOR4AQ9NXH8 423 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 COG5Q9UP83 839 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 CACNA2D1P54289 1103 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 TRMT5Q32P41 509 aaKnown RBP18.82■□□□□ 0.6
VARS2-209ENST00000477288 TMEM237Q96Q45 408 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 DGCR6LQ9BY27 220 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 UBAP1Q9NZ09 502 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 ARIH1Q9Y4X5 557 aaPredicted RBP18.82■□□□□ 0.6
VARS2-209ENST00000477288 SSTR1P30872 391 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 TAF5Q15542 800 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 ZNHIT3Q15649 155 aaPredicted RBP18.82■□□□□ 0.6
VARS2-209ENST00000477288 WSCD1Q658N2 575 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 ZPBP2Q6X784 338 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 SNX32Q86XE0 403 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 SEMA4AQ9H3S1 761 aa18.82■□□□□ 0.6
VARS2-209ENST00000477288 RIPK2O43353 540 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 SNRPD1P62314 119 aaKnown RBP18.81■□□□□ 0.6
VARS2-209ENST00000477288 OTOP1Q7RTM1 612 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms