RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 STX17P56962 302 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 CLDN2P57739 230 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 GABREP78334 506 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 MEA1Q16626 185 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 TAF1BQ53T94 588 aaPredicted RBP14.35□□□□□ -0.11
CCDC78-209ENST00000474647 BROXQ5VW32 411 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 TTI2Q6NXR4 508 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 PTAR1Q7Z6K3 402 aaPredicted RBP14.35□□□□□ -0.11
CCDC78-209ENST00000474647 CACTIN-AS1Q8N1I8 211 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 ATP11CQ8NB49 1132 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 TMEM145Q8NBT3 493 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 ZNF248Q8NDW4 579 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 OR13H1Q8NG92 308 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 GRIN3AQ8TCU5 1115 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 DEPDC7Q96QD5 511 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 SIK2Q9H0K1 926 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 MAN1B1Q9UKM7 699 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 CNTN6Q9UQ52 1028 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.35□□□□□ -0.11
CCDC78-209ENST00000474647 HS3ST4Q9Y661 456 aa14.35□□□□□ -0.11
CCDC78-209ENST00000474647 BICDL2A1A5D9 508 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 SNAP91O60641 907 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 HSF2BPO75031 334 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 USP12O75317 370 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 CSO75390 466 aaKnown RBP14.34□□□□□ -0.11
CCDC78-209ENST00000474647 PAGE1O75459 146 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 CLDN11O75508 207 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 PIAS2O75928 621 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 RHOCP08134 193 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 RRM1P23921 792 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 CHRNA3P32297 505 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 PPP1R2P41236 205 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 VASPP50552 380 aaPredicted RBP14.34□□□□□ -0.11
CCDC78-209ENST00000474647 TMPRSS3P57727 454 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 KRT83P78385 493 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 CFHR1Q03591 330 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 EIF4EBP2Q13542 120 aaPredicted RBP14.34□□□□□ -0.11
CCDC78-209ENST00000474647 ARHGAP44Q17R89 818 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 ZNF542PQ5EBM4 170 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 EFHC1Q5JVL4 640 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 OR6B2Q6IFH4 312 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 GJB7Q6PEY0 223 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 FAM183BPQ6ZVS7 135 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 HORMAD1Q86X24 394 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 TRIM59Q8IWR1 403 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 LSM14AQ8ND56 463 aaKnown RBP14.34□□□□□ -0.11
CCDC78-209ENST00000474647 ARRDC3Q96B67 414 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 PPP1R13BQ96KQ4 1090 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 APOLD1Q96LR9 279 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 SLC2A13Q96QE2 648 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 CPXM1Q96SM3 734 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 OSBPL2Q9H1P3 480 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 CPNE5Q9HCH3 593 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 KLHL11Q9NVR0 708 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 DNAJC28Q9NX36 388 aa14.34□□□□□ -0.11
CCDC78-209ENST00000474647 SCN8AQ9UQD0 1980 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 K7ERQ8 282 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 M0QYT0 321 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 OPA1O60313 960 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 NEBLO76041 1014 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 CNTN5O94779 1100 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 MT-CO1P00395 513 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 CKMT1AP12532 417 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 CDH4P55283 916 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 CCDC15Q0P6D6 951 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 MAPK8IP2Q13387 824 aaPredicted RBP14.33□□□□□ -0.12
CCDC78-209ENST00000474647 ZNF284Q2VY69 593 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 ARHGAP40Q5TG30 622 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 SEL1L3Q68CR1 1132 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 LINGO4Q6UY18 593 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 GCNT7Q6ZNI0 430 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 C14orf80Q86SX3 495 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 CREBRFQ8IUR6 639 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 SLC22A18ASQ8N1D0 253 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 OR2A12Q8NGT7 310 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 KCNE4Q8WWG9 221 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 ZNF578Q96N58 590 aaPredicted RBP14.33□□□□□ -0.12
CCDC78-209ENST00000474647 NOX5Q96PH1 765 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 CRACR2AQ9BSW2 395 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 C2orf49Q9BVC5 232 aaPredicted RBP14.33□□□□□ -0.12
CCDC78-209ENST00000474647 ABCG4Q9H172 646 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 SYNCQ9H7C4 482 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 EVA1BQ9NVM1 165 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 ASNSD1Q9NWL6 643 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 NLGN3Q9NZ94 848 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 VPS51Q9UID3 782 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 HS3ST2Q9Y278 367 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 OR51B4Q9Y5P0 310 aa14.33□□□□□ -0.12
CCDC78-209ENST00000474647 A6NNZ2 444 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 ERVH48-1M5A8F1 160 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 RNF103O00237 685 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 BIN1O00499 593 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 DAB1O75553 588 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 ENDOD1O94919 500 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 ADCY5O95622 1261 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 GNA14O95837 355 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 PRNPP04156 253 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 GLI1P08151 1106 aa14.32□□□□□ -0.12
CCDC78-209ENST00000474647 RECQLP46063 649 aaPredicted RBP14.32□□□□□ -0.12
CCDC78-209ENST00000474647 C3orf38Q5JPI3 329 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms