RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 DXOO77932 396 aaKnown RBP13.41□□□□□ -0.26
PTPN7-207ENST00000468385 MT-CO1P00395 513 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 MPOP05164 745 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 GLI1P08151 1106 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 MYF5P13349 255 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 GNA15P30679 374 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 PCBP4P57723 403 aaKnown RBP13.41□□□□□ -0.26
PTPN7-207ENST00000468385 HS1BP3Q53T59 392 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 GCNT7Q6ZNI0 430 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 WDTC1Q8N5D0 677 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 OR2A12Q8NGT7 310 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 RNF34Q969K3 372 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 APOLD1Q96LR9 279 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 DEPDC7Q96QD5 511 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 CPXM1Q96SM3 734 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 PSMB7Q99436 277 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 CALN1Q9BXU9 219 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 UBE2TQ9NPD8 197 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-207ENST00000468385 ASH1LQ9NR48 2969 aaKnown RBP13.41□□□□□ -0.26
PTPN7-207ENST00000468385 ASNSD1Q9NWL6 643 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 MAN1B1Q9UKM7 699 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 ZFR2Q9UPR6 939 aaKnown RBP13.41□□□□□ -0.26
PTPN7-207ENST00000468385 U3KQA8 63 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 MGAQ8IWI9 3026 aa13.41□□□□□ -0.26
PTPN7-207ENST00000468385 PPP1R3GB7ZBB8 358 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 K7ERQ8 282 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 KPNA3O00505 521 aaPredicted RBP13.4□□□□□ -0.26
PTPN7-207ENST00000468385 SNAP91O60641 907 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 HSF2BPO75031 334 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 PAGE1O75459 146 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 CLDN11O75508 207 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 GRAP2O75791 330 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 CNTN5O94779 1100 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 AFPP02771 609 aaKnown RBP13.4□□□□□ -0.26
PTPN7-207ENST00000468385 GP1BAP07359 652 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 BMP6P22004 513 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 HNRNPA2B1P22626 353 aaKnown RBP13.4□□□□□ -0.26
PTPN7-207ENST00000468385 AKT2P31751 481 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 CHRNA3P32297 505 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 PPP1R2P41236 205 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 CDH4P55283 916 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 MARSP56192 900 aaKnown RBP13.4□□□□□ -0.26
PTPN7-207ENST00000468385 CLDN2P57739 230 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 GABREP78334 506 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 KLHL10Q6JEL2 608 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 FOXR2Q6PJQ5 311 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 ABI3BPQ7Z7G0 1075 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 LSMEM2Q8N112 164 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 FAM181AQ8N9Y4 354 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 CHST14Q8NCH0 376 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 TMIEQ8NEW7 156 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 NELFBQ8WX92 580 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 TIGD1Q96MW7 591 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 MUC3BQ9H195 1237 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 CPNE5Q9HCH3 593 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 GPR27Q9NS67 375 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 NLGN3Q9NZ94 848 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 ATMQ13315 3056 aa13.4□□□□□ -0.26
PTPN7-207ENST00000468385 BECN2A8MW95 431 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 SMAD6O43541 496 aaKnown RBP13.39□□□□□ -0.27
PTPN7-207ENST00000468385 USP12O75317 370 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 CSO75390 466 aaKnown RBP13.39□□□□□ -0.27
PTPN7-207ENST00000468385 ALPPL2P10696 532 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 RRM1P23921 792 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 LSSP48449 732 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 TMPRSS3P57727 454 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 KRT83P78385 493 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 RHDQ02161 417 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 NME3Q13232 169 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 MTA1Q13330 715 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 TMEM259Q4ZIN3 620 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 ALFQ53S48 1182 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 TAF1BQ53T94 588 aaPredicted RBP13.39□□□□□ -0.27
PTPN7-207ENST00000468385 ZNF542PQ5EBM4 170 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 EFHC1Q5JVL4 640 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 OTUD1Q5VV17 481 aaPredicted RBP13.39□□□□□ -0.27
PTPN7-207ENST00000468385 SEL1L3Q68CR1 1132 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 GJB7Q6PEY0 223 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 OLFML1Q6UWY5 402 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 FAM183BPQ6ZVS7 135 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 ERN2Q76MJ5 926 aaKnown RBP13.39□□□□□ -0.27
PTPN7-207ENST00000468385 ATP11CQ8NB49 1132 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 IFT43Q96FT9 208 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 WBP1Q96G27 269 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 PPP1R13BQ96KQ4 1090 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 BMFQ96LC9 184 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 POLR1BQ9H9Y6 1135 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 ASCL3Q9NQ33 180 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 ANLNQ9NQW6 1124 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 VPS51Q9UID3 782 aa13.39□□□□□ -0.27
PTPN7-207ENST00000468385 FARP1Q9Y4F1 1045 aaPredicted RBP13.39□□□□□ -0.27
PTPN7-207ENST00000468385 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.39□□□□□ -0.27
PTPN7-207ENST00000468385 CAPN8A6NHC0 703 aa13.38□□□□□ -0.27
PTPN7-207ENST00000468385 I6L893 689 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-207ENST00000468385 K7ESM1 405 aa13.38□□□□□ -0.27
PTPN7-207ENST00000468385 SCAMP1O15126 338 aa13.38□□□□□ -0.27
PTPN7-207ENST00000468385 LZTS3O60299 673 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-207ENST00000468385 DAB1O75553 588 aa13.38□□□□□ -0.27
PTPN7-207ENST00000468385 NEBLO76041 1014 aa13.38□□□□□ -0.27
PTPN7-207ENST00000468385 PCDH8O95206 1070 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms