RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ZNF419Q96HQ0 510 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-207ENST00000467273 PNKPQ96T60 521 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 ACO2Q99798 780 aaKnown RBP5.8□□□□□ -1.48
PTCD3-207ENST00000467273 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 AGXT2Q9BYV1 514 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 TUFT1Q9NNX1 390 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 DSEQ9UL01 958 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 TIMM13Q9Y5L4 95 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-207ENST00000467273 MYO9AB2RTY4 2548 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 GON4LQ3T8J9 2241 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 TRAV19A0A0A6YYK7 116 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 A0A1B0GTW7 788 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 A0A1W2PQJ5 194 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 TCRBV21S2A2A0A5A6 115 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 SH3D21A4FU49 640 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-207ENST00000467273 C1QTNF3-AMACRE9PGA6 284 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 SGK1O00141 431 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 CBX4O00257 560 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 SLC9A3R1O14745 358 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-207ENST00000467273 TNFSF14O43557 240 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 NPHS1O60500 1241 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 KLF8O95600 359 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-207ENST00000467273 IGHDP01880 384 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 APODP05090 189 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 EDN1P05305 212 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 OR4Q2P0C623 313 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 HAPLN1P10915 354 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-207ENST00000467273 PYGMP11217 842 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 HNRNPLP14866 589 aaKnown RBP eCLIP5.79□□□□□ -1.48
PTCD3-207ENST00000467273 CPEP16870 476 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 HMGA1P17096 107 aaKnown RBP5.79□□□□□ -1.48
PTCD3-207ENST00000467273 XBP1P17861 261 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 TACR2P21452 398 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 PROZP22891 400 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 U2AF2P26368 475 aaKnown RBP eCLIP5.79□□□□□ -1.486e-15■□□□□ 9.1
PTCD3-207ENST00000467273 ITPKBP27987 946 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 HSPA4P34932 840 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 HNF1BP35680 557 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 MATKP42679 507 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 IL12RB1P42701 662 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 UCNP55089 124 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 RPL11P62913 178 aaKnown RBP5.79□□□□□ -1.48
PTCD3-207ENST00000467273 ZBTB6Q15916 424 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 KYAT1Q16773 422 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 INAVAQ3KP66 663 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 MGAT5BQ3V5L5 792 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 NAIF1Q69YI7 327 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-207ENST00000467273 TXNDC8Q6A555 127 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 DSTYKQ6XUX3 929 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 TTC30AQ86WT1 665 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 CREBRFQ8IUR6 639 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 SLC41A1Q8IVJ1 513 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 CARFQ8N187 725 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 ALLCQ8N6M5 410 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 TTC9BQ8N6N2 239 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 TRIML1Q8N9V2 468 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 FSIP1Q8NA03 581 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 TXNDC5Q8NBS9 432 aaKnown RBP5.79□□□□□ -1.48
PTCD3-207ENST00000467273 C1orf131Q8NDD1 294 aaKnown RBP5.79□□□□□ -1.48
PTCD3-207ENST00000467273 SETD7Q8WTS6 366 aaKnown RBP5.79□□□□□ -1.48
PTCD3-207ENST00000467273 HMGB4Q8WW32 186 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 DNASE2BQ8WZ79 361 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 USP7Q93009 1102 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 C18orf25Q96B23 403 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-207ENST00000467273 SEPT5Q99719 369 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-207ENST00000467273 ORAI3Q9BRQ5 295 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 ZCWPW1Q9H0M4 648 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 CDIP1Q9H305 208 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 FSCN3Q9NQT6 498 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 TM7SF3Q9NS93 570 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 GULP1Q9UBP9 304 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 UBQLN1Q9UMX0 589 aaKnown RBP5.79□□□□□ -1.48
PTCD3-207ENST00000467273 PCDHGA1Q9Y5H4 931 aa5.79□□□□□ -1.48
PTCD3-207ENST00000467273 HELZP42694 1942 aaKnown RBP5.79□□□□□ -1.48
PTCD3-207ENST00000467273 COL5A1P20908 1838 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-207ENST00000467273 IGHV1OR15-9A0A0B4J2B8 117 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 ARHGEF35A5YM69 484 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 GOLGA6CA6NDK9 693 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 GOLGA6BA6NDN3 693 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 ALG1L2C9J202 215 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 FAM47E-STBD1D6RA91 191 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 NDUFS2O75306 463 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 TOM1L1O75674 476 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 KAT7O95251 611 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 SLPIP03973 132 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 C1SP09871 688 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 ATXN1LP0C7T5 689 aaKnown RBP5.78□□□□□ -1.48
PTCD3-207ENST00000467273 GOLGA6DP0CG33 693 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 GRK2P25098 689 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 GRK3P35626 688 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 MC3RP41968 323 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 GRK6P43250 576 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 SCNN1BP51168 640 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 GUCY2FP51841 1108 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 LILRA4P59901 499 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 RPL10AP62906 217 aaKnown RBP5.78□□□□□ -1.48
PTCD3-207ENST00000467273 DMP1Q13316 513 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-207ENST00000467273 STAT4Q14765 748 aa5.78□□□□□ -1.48
PTCD3-207ENST00000467273 NFE2Q16621 373 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms