RNA–Protein interactions for RNA: ENST00000465409.1

CUEDC2-202, Transcript of CUE domain containing 2, humanhuman

TSL 2

Gene CUEDC2, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-202ENST00000465409 TPSD1Q9BZJ3 242 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 GRPEL1Q9HAV7 217 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 PCDH18Q9HCL0 1135 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 DDX56Q9NY93 547 aaKnown RBP13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 NCKAP1Q9Y2A7 1128 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 VPS13AQ96RL7 3174 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 CHD5Q8TDI0 1954 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 IGHV1OR15-9A0A0B4J2B8 117 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 RASA4BC9J798 803 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 DCLK1O15075 740 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 RASA4O43374 803 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 NRDCO43847 1150 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 SNAP91O60641 907 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 MT-CO1P00395 513 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 IL4RP24394 825 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 CD6P30203 668 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 HOXD12P35452 270 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 SSR1P43307 286 aaKnown RBP13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 RECQLP46063 649 aaPredicted RBP13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 NOP2P46087 812 aaKnown RBP13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 STK19P49842 368 aaPredicted RBP13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 TPMTP51580 245 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 VAV2P52735 878 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 CDH6P55285 790 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 ARF5P84085 180 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 KRT81Q14533 505 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 RFTN1Q14699 578 aaPredicted RBP13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 CST6Q15828 149 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 PMS2CLQ68D20 193 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 C11orf63Q6NUN7 778 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 RAD9BQ6WBX8 426 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 RHOT1Q8IXI2 618 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 KCTD6Q8NC69 237 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 HSPH1Q92598 858 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 FOXJ1Q92949 421 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 FAF2Q96CS3 445 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 ZNF419Q96HQ0 510 aaPredicted RBP13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 KLC2Q9H0B6 622 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 KDM4CQ9H3R0 1056 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 SGK2Q9HBY8 427 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 GPATCH2LQ9NWQ4 482 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 WSB2Q9NYS7 404 aaPredicted RBP13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 GMEB2Q9UKD1 530 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 PPM1HQ9ULR3 514 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 FZD4Q9ULV1 537 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 ALG6Q9Y672 507 aa13.4□□□□□ -0.26
CUEDC2-202ENST00000465409 PLXND1Q9Y4D7 1925 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 ARHGAP6O43182 974 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 SLC7A4O43246 635 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 CD160O95971 181 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 GSRP00390 522 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 PRNPP04156 253 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 TCF4P15884 667 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 SLC8A1P32418 973 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 ACVRL1P37023 503 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 MRE11P49959 708 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 IL10RBQ08334 325 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 KIF5AQ12840 1032 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 SMTNL2Q2TAL5 461 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 CARD16Q5EG05 197 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 TMCO3Q6UWJ1 677 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 KIAA1324Q6UXG2 1013 aaKnown RBP13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 PRR23BQ6ZRT6 265 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 ASCL5Q7RTU5 278 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 FAM160A2Q8N612 972 aaPredicted RBP13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 OR2A12Q8NGT7 310 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 FATE1Q969F0 183 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 FAM131CQ96AQ9 280 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 ZNF599Q96NL3 588 aa13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 PABPC3Q9H361 631 aaKnown RBP13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
CUEDC2-202ENST00000465409 C1QTNF3-AMACRE9PGA6 284 aa13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 SMAD6O43541 496 aaKnown RBP13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 PSTPIP1O43586 416 aa13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 BUB1O43683 1085 aa13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 BUB1BO60566 1050 aaPredicted RBP13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 GFRA3O60609 400 aa13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 PRAMEF11O60813 436 aa13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 NDUFS2O75306 463 aa13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 ZNF821O75541 412 aaPredicted RBP13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 EPN2O95208 641 aa13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 POP4O95707 220 aaKnown RBP13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 ZFXP17010 805 aaPredicted RBP13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 AMPD1P23109 780 aa13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 KDELR1P24390 212 aa13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 HOXD11P31277 338 aaPredicted RBP13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 CSNK1DP48730 415 aa13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 SNRPD1P62314 119 aaKnown RBP13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 RAD51Q06609 339 aa13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 NSUN2Q08J23 767 aaKnown RBP eCLIP13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 SRSF5Q13243 272 aaKnown RBP13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 DPYSL3Q14195 570 aa13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 GRM3Q14832 879 aa13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 PAFAH1B3Q15102 231 aaKnown RBP13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 ANKRD20A8PQ5CZ79 823 aa13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 DAB2IPQ5VWQ8 1189 aa13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 TXNRD3NBQ6F5E7 133 aa13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 C22orf39Q6P5X5 142 aa13.38□□□□□ -0.27
CUEDC2-202ENST00000465409 ZNF662Q6ZS27 426 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms