RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 APOBEC3GQ9HC16 384 aaKnown RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 JPH1Q9HDC5 661 aaPredicted RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 CD320Q9NPF0 282 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 XPNPEP3Q9NQH7 507 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 PDLIM7Q9NR12 457 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 NRBP2Q9NSY0 501 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 DDX18Q9NVP1 670 aaKnown RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 GID8Q9NWU2 228 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 HSFX1Q9UBD0 423 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 RIMS3Q9UJD0 308 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 BARX2Q9UMQ3 279 aaPredicted RBP7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 FADS3Q9Y5Q0 445 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 RAD54BQ9Y620 910 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 WDR81Q562E7 1941 aa7.33□□□□□ -1.24
CLSTN1-204ENST00000464286 ADARB2-AS1A8MUL3 147 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 H3BNH8 94 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 AIM2O14862 343 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 OGTO15294 1046 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 PSMD3O43242 534 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 MTSS1O43312 755 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 DCXO43602 365 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 KLHL41O60662 606 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 TRPA1O75762 1119 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 CABYRO75952 493 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 C1QAP02745 245 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 MYL3P08590 195 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 CSH1P0DML2 217 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 CSH2P0DML3 217 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 YBX3P16989 372 aaKnown RBP eCLIP7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 SLC7A1P30825 629 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 SDC4P31431 198 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 SLC5A2P31639 672 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 SCNN1AP37088 669 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 RPL14P50914 215 aaKnown RBP7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 SCNN1BP51168 640 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 GALK1P51570 392 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 OAZ1P54368 228 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 INHBCP55103 352 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 RPL10AP62906 217 aaKnown RBP7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 MYBPC1Q00872 1141 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 BMPR2Q13873 1038 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 INPP5AQ14642 412 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 PCLAFQ15004 111 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 ZNF423Q2M1K9 1284 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 SMTNL2Q2TAL5 461 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 HSF5Q4G112 596 aaPredicted RBP7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 C2CD6Q53TS8 623 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 SAMD4BQ5PRF9 694 aaKnown RBP7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 FAM160B1Q5W0V3 765 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 SPOPLQ6IQ16 392 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 NIPAL1Q6NVV3 410 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 LLGL2Q6P1M3 1020 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 CASC4Q6P4E1 433 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 KLHL35Q6PF15 583 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 HACD2Q6Y1H2 254 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 FRMD7Q6ZUT3 714 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 NCCRP1Q6ZVX7 275 aaPredicted RBP7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 FKBP9P1Q75LS8 142 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 ANKRD23Q86SG2 305 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 TMEM110Q86TL2 294 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 SNX32Q86XE0 403 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 XYLT1Q86Y38 959 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 ERO1BQ86YB8 467 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 CHERPQ8IWX8 916 aaKnown RBP7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 POU5F2Q8N7G0 328 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 PLD5Q8N7P1 536 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 TDRD5Q8NAT2 981 aaKnown RBP7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 LEMD2Q8NC56 503 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 HIPK4Q8NE63 616 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 ZSWIM2Q8NEG5 633 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 BHLHE22Q8NFJ8 381 aaPredicted RBP7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 ADAMTS16Q8TE57 1224 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 TFB1MQ8WVM0 346 aaKnown RBP7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 KBTBD7Q8WVZ9 684 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 FAM151AQ8WW52 585 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 CCDC126Q96EE4 140 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 MAGED4Q96JG8 741 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 FAM167AQ96KS9 214 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 SIGLEC10Q96LC7 697 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 CCDC138Q96M89 665 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 PPP1R2P1Q96PQ5 205 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 QKIQ96PU8 341 aaKnown RBP eCLIP7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 CDRT15Q96T59 188 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 PDCD2LQ9BRP1 358 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 ANKRD60Q9BZ19 345 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 UNKQ9C0B0 810 aaKnown RBP7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 IL22Q9GZX6 179 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 C12orf65Q9H3J6 166 aaKnown RBP7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 MUC13Q9H3R2 512 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 LRRC40Q9H9A6 602 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 COG4Q9H9E3 785 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 WDR41Q9HAD4 459 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 LRRC4Q9HBW1 653 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 PXMP2Q9NR77 195 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 ATAD3AQ9NVI7 634 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 APPL1Q9UKG1 709 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 TLK1Q9UKI8 766 aa7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 G3BP2Q9UN86 482 aaKnown RBP7.32□□□□□ -1.24
CLSTN1-204ENST00000464286 SLC30A1Q9Y6M5 507 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms