RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 STK40Q8N2I9 435 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 CARNMT1Q8N4J0 409 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 ZNF557Q8N988 423 aaPredicted RBP8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 TMEM35BQ8NCS4 154 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 PIP4K2CQ8TBX8 421 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 PTPRN2Q92932 1015 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 KCTD12Q96CX2 325 aaKnown RBP8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 NXPE2Q96DL1 559 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 CNDP2Q96KP4 475 aaKnown RBP8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 SERPINB11Q96P15 392 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 PCDHB18PQ96TA0 734 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 SYT11Q9BT88 431 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 PRORYQ9H606 182 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 ARHGAP20Q9P2F6 1191 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 SLCO3A1Q9UIG8 710 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 NCKAP1Q9Y2A7 1128 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 TLR6Q9Y2C9 796 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 CEP83Q9Y592 693 aa8.16□□□□□ -1.1
CDC42BPA-210ENST00000462553 SPTA1P02549 2419 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 AHCTF1Q8WYP5 2266 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 EDDM13A0A1B0GTR0 161 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 A0A1W2PQC6 194 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 TARSL2A2RTX5 802 aaKnown RBP8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 LRRC72A6NJI9 287 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 HSF2BPO75031 334 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 LDOC1O95751 146 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 TRUB2O95900 331 aaKnown RBP8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 MOCS2O96007 188 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 GOT1P17174 413 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 TFE3P19532 575 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 SLC8A1P32418 973 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 EIF2S3P41091 472 aaKnown RBP8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 ABCG1P45844 678 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 RXRGP48443 463 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 NUMBP49757 651 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 GSCP56915 257 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 ST8SIA6P61647 398 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 YWHAZP63104 245 aaKnown RBP8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 FANCCQ00597 558 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 CDR2Q01850 454 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 SLC6A3Q01959 620 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 BNIP3Q12983 259 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 CDH18Q13634 790 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 NFKBIBQ15653 356 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 SKOR2Q2VWA4 1001 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 ARTNQ5T4W7 220 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 HES3Q5TGS1 186 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 RAP1GAP2Q684P5 730 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 IRF2BP2Q7Z5L9 587 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 CIR1Q86X95 450 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 EID2Q8N6I1 236 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 GANCQ8TET4 914 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 FRS2Q8WU20 508 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 CPA5Q8WXQ8 436 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 RPL10LQ96L21 214 aaKnown RBP8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 PCMTD1Q96MG8 357 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 NOX5Q96PH1 765 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 SPAG5Q96R06 1193 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 UBL7Q96S82 380 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 GDF3Q9NR23 364 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 AASDHPPTQ9NRN7 309 aa8.15□□□□□ -1.1
CDC42BPA-210ENST00000462553 LRP4O75096 1905 aa8.15□□□□□ -1.11
CDC42BPA-210ENST00000462553 FLNCQ14315 2725 aa8.15□□□□□ -1.11
CDC42BPA-210ENST00000462553 UBR5O95071 2799 aaPredicted RBP8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 SCN8AQ9UQD0 1980 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 TYW5A2RUC4 315 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 KCNU1A8MYU2 1149 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 I6L893 689 aaPredicted RBP8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 TLR4O00206 839 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 YKT6O15498 198 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 RNASEH1O60930 286 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 ZIC2O95409 532 aaPredicted RBP8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 GJB6O95452 261 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 ADH1BP00325 375 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 ITGAVP06756 1048 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 C1SP09871 688 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 UNGP13051 313 aaPredicted RBP8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 ABCB4P21439 1286 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 TACR2P21452 398 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 C5AR1P21730 350 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 MMP8P22894 467 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 HNF1BP35680 557 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 FLT3P36888 993 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 SCNN1AP37088 669 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 IRAK1P51617 712 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 ECT2LQ008S8 904 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 CENPCQ03188 943 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 TARDBPQ13148 414 aaKnown RBP eCLIP8.14□□□□□ -1.112e-9■■■■□ 20.3
CDC42BPA-210ENST00000462553 RTP5Q14D33 572 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 CLEC16AQ2KHT3 1053 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 PROX2Q3B8N5 592 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 ZC3H12AQ5D1E8 599 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 EFHC1Q5JVL4 640 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 AGBL4Q5VU57 503 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 NAPEPLDQ6IQ20 393 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 CXorf57Q6NSI4 855 aaKnown RBP8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 SND1Q7KZF4 910 aaKnown RBP eCLIP8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 BNIPLQ7Z465 357 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 ERICH1Q86X53 443 aa8.14□□□□□ -1.11
CDC42BPA-210ENST00000462553 ZDHHC17Q8IUH5 632 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms