RNA–Protein interactions for RNA: ENST00000458022.6

SHF-202, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHF, Length 1,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-202ENST00000458022 RNF225M0QZC1 329 aaPredicted RBP16.7■□□□□ 0.26
SHF-202ENST00000458022 CETN3O15182 167 aa16.7■□□□□ 0.26
SHF-202ENST00000458022 NME1P15531 152 aaKnown RBP16.7■□□□□ 0.26
SHF-202ENST00000458022 CMA1P23946 247 aa16.7■□□□□ 0.26
SHF-202ENST00000458022 BRD2P25440 801 aaKnown RBP16.7■□□□□ 0.26
SHF-202ENST00000458022 LRMPQ12912 555 aa16.7■□□□□ 0.26
SHF-202ENST00000458022 EIF4EBP2Q13542 120 aaPredicted RBP16.7■□□□□ 0.26
SHF-202ENST00000458022 ZSCAN23Q3MJ62 389 aa16.7■□□□□ 0.26
SHF-202ENST00000458022 DCAF17Q5H9S7 520 aaPredicted RBP16.7■□□□□ 0.26
SHF-202ENST00000458022 RABGAP1LQ5R372 815 aa16.7■□□□□ 0.26
SHF-202ENST00000458022 Q6ZSR6 202 aa16.7■□□□□ 0.26
SHF-202ENST00000458022 EFL1Q7Z2Z2 1120 aaKnown RBP16.7■□□□□ 0.26
SHF-202ENST00000458022 WDR36Q8NI36 951 aaKnown RBP16.7■□□□□ 0.26
SHF-202ENST00000458022 ARRDC3Q96B67 414 aa16.7■□□□□ 0.26
SHF-202ENST00000458022 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.7■□□□□ 0.26
SHF-202ENST00000458022 SALL4Q9UJQ4 1053 aa16.7■□□□□ 0.26
SHF-202ENST00000458022 CFAP45Q9UL16 551 aa16.7■□□□□ 0.26
SHF-202ENST00000458022 ATXN7L1Q9ULK2 861 aaPredicted RBP16.7■□□□□ 0.26
SHF-202ENST00000458022 ZFR2Q9UPR6 939 aaKnown RBP16.7■□□□□ 0.26
SHF-202ENST00000458022 OR51B4Q9Y5P0 310 aa16.7■□□□□ 0.26
SHF-202ENST00000458022 HS3ST3A1Q9Y663 406 aa16.7■□□□□ 0.26
SHF-202ENST00000458022 NYNRINQ9P2P1 1898 aaKnown RBP16.69■□□□□ 0.26
SHF-202ENST00000458022 CPED1A4D0V7 1026 aa16.69■□□□□ 0.26
SHF-202ENST00000458022 K7ELQ4 463 aaPredicted RBP16.69■□□□□ 0.26
SHF-202ENST00000458022 KPNA3O00505 521 aaPredicted RBP16.69■□□□□ 0.26
SHF-202ENST00000458022 EFSO43281 561 aa16.69■□□□□ 0.26
SHF-202ENST00000458022 TRUB2O95900 331 aaKnown RBP16.69■□□□□ 0.26
SHF-202ENST00000458022 F13A1P00488 732 aa16.69■□□□□ 0.26
SHF-202ENST00000458022 ZSCAN22P10073 491 aaPredicted RBP16.69■□□□□ 0.26
SHF-202ENST00000458022 FZD2Q14332 565 aa16.69■□□□□ 0.26
SHF-202ENST00000458022 LINC00303Q3SY05 128 aa16.69■□□□□ 0.26
SHF-202ENST00000458022 TMEM259Q4ZIN3 620 aa16.69■□□□□ 0.26
SHF-202ENST00000458022 OR6B2Q6IFH4 312 aa16.69■□□□□ 0.26
SHF-202ENST00000458022 KYAT3Q6YP21 454 aaKnown RBP16.69■□□□□ 0.26
SHF-202ENST00000458022 PTAR1Q7Z6K3 402 aaPredicted RBP16.69■□□□□ 0.26
SHF-202ENST00000458022 ATP6V0D2Q8N8Y2 350 aa16.69■□□□□ 0.26
SHF-202ENST00000458022 TMIEQ8NEW7 156 aa16.69■□□□□ 0.26
SHF-202ENST00000458022 OR52K2Q8NGK3 314 aa16.69■□□□□ 0.26
SHF-202ENST00000458022 BMFQ96LC9 184 aa16.69■□□□□ 0.26
SHF-202ENST00000458022 STARD5Q9NSY2 213 aa16.69■□□□□ 0.26
SHF-202ENST00000458022 SLC12A6Q9UHW9 1150 aa16.69■□□□□ 0.26
SHF-202ENST00000458022 HS3ST2Q9Y278 367 aa16.69■□□□□ 0.26
SHF-202ENST00000458022 PCDHB4Q9Y5E5 795 aa16.69■□□□□ 0.26
SHF-202ENST00000458022 UBR5O95071 2799 aaPredicted RBP16.68■□□□□ 0.26
SHF-202ENST00000458022 SPTY2D1-AS1A0A0U1RR47 76 aa16.68■□□□□ 0.26
SHF-202ENST00000458022 H3BM21 787 aa16.68■□□□□ 0.26
SHF-202ENST00000458022 SLC16A3O15427 465 aaKnown RBP16.68■□□□□ 0.26
SHF-202ENST00000458022 BNIP3LO60238 219 aa16.68■□□□□ 0.26
SHF-202ENST00000458022 TNFSF15O95150 251 aa16.68■□□□□ 0.26
SHF-202ENST00000458022 ITGA2BP08514 1039 aa16.68■□□□□ 0.26
SHF-202ENST00000458022 SRCP12931 536 aa16.68■□□□□ 0.26
SHF-202ENST00000458022 CHRNA3P32297 505 aa16.68■□□□□ 0.26
SHF-202ENST00000458022 PDX1P52945 283 aa16.68■□□□□ 0.26
SHF-202ENST00000458022 COLEC12Q5KU26 742 aa16.68■□□□□ 0.26
SHF-202ENST00000458022 SEL1L3Q68CR1 1132 aa16.68■□□□□ 0.26
SHF-202ENST00000458022 FBXL22Q6P050 247 aa16.68■□□□□ 0.26
SHF-202ENST00000458022 ATG14Q6ZNE5 492 aa16.68■□□□□ 0.26
SHF-202ENST00000458022 PARGQ86W56 976 aa16.68■□□□□ 0.26
SHF-202ENST00000458022 OR2A12Q8NGT7 310 aa16.68■□□□□ 0.26
SHF-202ENST00000458022 WDR48Q8TAF3 677 aa16.68■□□□□ 0.26
SHF-202ENST00000458022 RNF34Q969K3 372 aa16.68■□□□□ 0.26
SHF-202ENST00000458022 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.68■□□□□ 0.26
SHF-202ENST00000458022 VPS28Q9UK41 221 aa16.68■□□□□ 0.26
SHF-202ENST00000458022 CCDC187A0A096LP49 1063 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 POM121BA6NF01 834 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 TPP1O14773 563 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 AQP9O43315 295 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 PCDH8O95206 1070 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 CALCAP01258 141 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 PRNPP04156 253 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 GPD2P43304 727 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 ACADSBP45954 432 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 PITX1P78337 314 aaPredicted RBP16.67■□□□□ 0.26
SHF-202ENST00000458022 CENPCQ03188 943 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 NR0B2Q15466 257 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 C6orf132Q5T0Z8 1188 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 FOXR1Q6PIV2 292 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 CRTC1Q6UUV9 634 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 ERN2Q76MJ5 926 aaKnown RBP16.67■□□□□ 0.26
SHF-202ENST00000458022 SLC35C1Q96A29 364 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 CCDC114Q96M63 670 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 HDAC8Q9BY41 377 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 POPDC2Q9HBU9 364 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 DYRK4Q9NR20 520 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 ST7Q9NRC1 585 aa16.67■□□□□ 0.26
SHF-202ENST00000458022 FARP1Q9Y4F1 1045 aaPredicted RBP16.67■□□□□ 0.26
SHF-202ENST00000458022 COL27A1Q8IZC6 1860 aaPredicted RBP16.67■□□□□ 0.26
SHF-202ENST00000458022 RNF103O00237 685 aa16.66■□□□□ 0.26
SHF-202ENST00000458022 SUV39H1O43463 412 aa16.66■□□□□ 0.26
SHF-202ENST00000458022 MT-CO1P00395 513 aa16.66■□□□□ 0.26
SHF-202ENST00000458022 ITGB2P05107 769 aa16.66■□□□□ 0.26
SHF-202ENST00000458022 SLC2A3P11169 496 aa16.66■□□□□ 0.26
SHF-202ENST00000458022 ITGB6P18564 788 aa16.66■□□□□ 0.26
SHF-202ENST00000458022 SYKP43405 635 aa16.66■□□□□ 0.26
SHF-202ENST00000458022 RABIFP47224 123 aa16.66■□□□□ 0.26
SHF-202ENST00000458022 YWHAZP63104 245 aaKnown RBP16.66■□□□□ 0.26
SHF-202ENST00000458022 DNM1Q05193 864 aaKnown RBP16.66■□□□□ 0.26
SHF-202ENST00000458022 DEFB133Q30KQ1 61 aa16.66■□□□□ 0.26
SHF-202ENST00000458022 PERM1Q5SV97 790 aa16.66■□□□□ 0.26
SHF-202ENST00000458022 STK32AQ8WU08 396 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms