RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 TBC1D3CQ6IPX1 549 aa20.8■□□□□ 0.92
NCKIPSD-206ENST00000439518 ZNF783Q6ZMS7 281 aa20.8■□□□□ 0.92
NCKIPSD-206ENST00000439518 PHLDB2Q86SQ0 1253 aa20.8■□□□□ 0.92
NCKIPSD-206ENST00000439518 TBC1D3Q8IZP1 549 aaPredicted RBP20.8■□□□□ 0.92
NCKIPSD-206ENST00000439518 ANKRD20A12PQ8NF67 263 aa20.8■□□□□ 0.92
NCKIPSD-206ENST00000439518 NEK11Q8NG66 645 aa20.8■□□□□ 0.92
NCKIPSD-206ENST00000439518 OR2A12Q8NGT7 310 aa20.8■□□□□ 0.92
NCKIPSD-206ENST00000439518 RHBDD1Q8TEB9 315 aa20.8■□□□□ 0.92
NCKIPSD-206ENST00000439518 RXFP2Q8WXD0 754 aa20.8■□□□□ 0.92
NCKIPSD-206ENST00000439518 ERGIC2Q96RQ1 377 aa20.8■□□□□ 0.92
NCKIPSD-206ENST00000439518 C11orf70Q9BRQ4 267 aa20.8■□□□□ 0.92
NCKIPSD-206ENST00000439518 ARHGAP20Q9P2F6 1191 aa20.8■□□□□ 0.92
NCKIPSD-206ENST00000439518 APOBEC2Q9Y235 224 aaKnown RBP20.8■□□□□ 0.92
NCKIPSD-206ENST00000439518 TMEM8BA6NDV4 472 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 C2CD4BA6NLJ0 364 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 C1QTNF3-AMACRE9PGA6 284 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 RRM1P23921 792 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 CD38P28907 300 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 ADRA1BP35368 520 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 CLCN6P51797 869 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 C15orf59Q2T9L4 293 aaPredicted RBP20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 POM121L1PQ3SYA9 428 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 LINGO4Q6UY18 593 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 PNPLA1Q8N8W4 532 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 OR7D4Q8NG98 312 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 JOSD2Q8TAC2 188 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 SKA1Q96BD8 255 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 SERAC1Q96JX3 654 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 ZYG11BQ9C0D3 744 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 AASDHPPTQ9NRN7 309 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 TOR4AQ9NXH8 423 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 PPARGC1AQ9UBK2 798 aaKnown RBP20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 CFAP47Q6ZTR5 3102 aa20.79■□□□□ 0.92
NCKIPSD-206ENST00000439518 A0A1B0GTQ1 180 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 BNIP3LO60238 219 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 ZMPSTE24O75844 475 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 DKK1O94907 266 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 GJB6O95452 261 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 MBD3O95983 291 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 CTSLP07711 333 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 GLDCP23378 1020 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 SDC4P31431 198 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 GRK6P43250 576 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 PTPN9P43378 593 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 GSCP56915 257 aaPredicted RBP20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 TAS2R38P59533 333 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 NRG1Q02297 640 aaPredicted RBP20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 UBXN1Q04323 297 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 CLEC16AQ2KHT3 1053 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 CCDC183Q5T5S1 534 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 MANEALQ5VSG8 457 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 TRIM69Q86WT6 500 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 CENPIQ92674 756 aaPredicted RBP20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 PCMTD1Q96MG8 357 aaPredicted RBP20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 ELF4Q99607 663 aaPredicted RBP20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 ZMIZ1Q9ULJ6 1067 aa20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 FARP1Q9Y4F1 1045 aaPredicted RBP20.78■□□□□ 0.92
NCKIPSD-206ENST00000439518 DMXL2Q8TDJ6 3036 aa20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 ATXN1LP0C7T5 689 aaKnown RBP20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 CHRNA3P32297 505 aa20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 NUDT1P36639 197 aa20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 NSFP46459 744 aaKnown RBP20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 CDO1Q16878 200 aa20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 PRAMEF14Q5SWL7 426 aa20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 PIP5KL1Q5T9C9 394 aa20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 NAPEPLDQ6IQ20 393 aa20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 C22orf39Q6P5X5 142 aa20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 STRADAQ7RTN6 431 aa20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 PHF13Q86YI8 300 aaPredicted RBP20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 TMIEQ8NEW7 156 aa20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 CCDC114Q96M63 670 aa20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 SPON2Q9BUD6 331 aa20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 OSBPL2Q9H1P3 480 aa20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 ADAM22Q9P0K1 906 aa20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 OR12D3Q9UGF7 316 aa20.77■□□□□ 0.92
NCKIPSD-206ENST00000439518 PKD1L2Q7Z442 2459 aa20.77■□□□□ 0.91
NCKIPSD-206ENST00000439518 ANKRD11Q6UB99 2663 aaPredicted RBP20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 CBX4O00257 560 aa20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 ZNF821O75541 412 aaPredicted RBP20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 KRT3P12035 628 aa20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 CDK11BP21127 795 aaKnown RBP20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 RFC1P35251 1148 aaPredicted RBP20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 HDAC4P56524 1084 aa20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 NXPH1P58417 271 aa20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 IL9RQ01113 521 aa20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 GNA12Q03113 381 aa20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 SLC20A2Q08357 652 aa20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 SHBQ15464 509 aa20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 ARL13BQ3SXY8 428 aa20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 PRPF39Q86UA1 669 aaKnown RBP20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 DRC7Q8IY82 874 aa20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 MFSD2AQ8NA29 543 aa20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 CHST14Q8NCH0 376 aa20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 TNKS2Q9H2K2 1166 aa20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 RETREG1Q9H6L5 497 aa20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 PREBQ9HCU5 417 aa20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 NEU3Q9UQ49 428 aa20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 DMTF1Q9Y222 760 aa20.76■□□□□ 0.91
NCKIPSD-206ENST00000439518 FAM72CH0Y354 149 aa20.75■□□□□ 0.91
NCKIPSD-206ENST00000439518 TLR4O00206 839 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms