RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 OVCA2Q8WZ82 227 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 CWH43Q9H720 699 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 RBM22Q9NW64 420 aaKnown RBP eCLIP26.18■■□□□ 1.789e-7■■□□□ 12.8
CPNE1-216ENST00000437340 UBP1Q9NZI7 540 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 SLC12A4Q9UP95 1085 aa26.18■■□□□ 1.78
CPNE1-216ENST00000437340 PTPRSQ13332 1948 aa26.17■■□□□ 1.78
CPNE1-216ENST00000437340 COL4A6Q14031 1691 aa26.17■■□□□ 1.78
CPNE1-216ENST00000437340 ERVK-10P10266 1014 aa26.17■■□□□ 1.78
CPNE1-216ENST00000437340 ATF6P18850 670 aa26.17■■□□□ 1.78
CPNE1-216ENST00000437340 CCDC15Q0P6D6 951 aa26.17■■□□□ 1.78
CPNE1-216ENST00000437340 HNRNPDQ14103 355 aaKnown RBP26.17■■□□□ 1.78
CPNE1-216ENST00000437340 SPRED3Q2MJR0 410 aa26.17■■□□□ 1.78
CPNE1-216ENST00000437340 ZNF398Q8TD17 642 aa26.17■■□□□ 1.78
CPNE1-216ENST00000437340 ZNF419Q96HQ0 510 aaPredicted RBP26.17■■□□□ 1.78
CPNE1-216ENST00000437340 IGSF21Q96ID5 467 aa26.17■■□□□ 1.78
CPNE1-216ENST00000437340 KIFC1Q9BW19 673 aa26.17■■□□□ 1.78
CPNE1-216ENST00000437340 SLC13A1Q9BZW2 595 aa26.17■■□□□ 1.78
CPNE1-216ENST00000437340 RXFP1Q9HBX9 757 aa26.17■■□□□ 1.78
CPNE1-216ENST00000437340 PCMTD2Q9NV79 361 aa26.17■■□□□ 1.78
CPNE1-216ENST00000437340 HBS1LQ9Y450 684 aaKnown RBP26.17■■□□□ 1.78
CPNE1-216ENST00000437340 USH1CQ9Y6N9 552 aa26.17■■□□□ 1.78
CPNE1-216ENST00000437340 CAPN7Q9Y6W3 813 aa26.17■■□□□ 1.78
CPNE1-216ENST00000437340 GREB1Q4ZG55 1949 aa26.17■■□□□ 1.78
CPNE1-216ENST00000437340 ATP9BO43861 1147 aa26.16■■□□□ 1.78
CPNE1-216ENST00000437340 TLR5O60602 858 aa26.16■■□□□ 1.78
CPNE1-216ENST00000437340 HLA-DQB2P05538 268 aa26.16■■□□□ 1.78
CPNE1-216ENST00000437340 ITGA2BP08514 1039 aa26.16■■□□□ 1.78
CPNE1-216ENST00000437340 ARMC3Q5W041 872 aa26.16■■□□□ 1.78
CPNE1-216ENST00000437340 FBXL22Q6P050 247 aa26.16■■□□□ 1.78
CPNE1-216ENST00000437340 APOL2Q9BQE5 337 aa26.16■■□□□ 1.78
CPNE1-216ENST00000437340 ENTPD7Q9NQZ7 604 aa26.16■■□□□ 1.78
CPNE1-216ENST00000437340 HSFX1Q9UBD0 423 aa26.16■■□□□ 1.78
CPNE1-216ENST00000437340 NEBLO76041 1014 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 GALNTL6Q49A17 601 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 KYAT3Q6YP21 454 aaKnown RBP26.15■■□□□ 1.78
CPNE1-216ENST00000437340 PDZD8Q8NEN9 1154 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 SPATA22Q8NHS9 363 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 GIPC2Q8TF65 315 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 SLC17A6Q9P2U8 582 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 PSAT1Q9Y617 370 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 UPP2O95045 317 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 PEX11BO96011 259 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 ALDOAP04075 364 aaKnown RBP26.15■■□□□ 1.78
CPNE1-216ENST00000437340 SPRP35270 261 aaPredicted RBP26.15■■□□□ 1.78
CPNE1-216ENST00000437340 RENBPP51606 427 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 DBN1Q16643 649 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 ALFQ53S48 1182 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 SNX30Q5VWJ9 437 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 TMEM199Q8N511 208 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 RAB3IL1Q8TBN0 382 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 PTPRN2Q92932 1015 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 ATP2A3Q93084 1043 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 CHRAC1Q9NRG0 131 aa26.15■■□□□ 1.78
CPNE1-216ENST00000437340 AFF4Q9UHB7 1163 aaKnown RBP26.15■■□□□ 1.78
CPNE1-216ENST00000437340 ADAM12O43184 909 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 TROVE2P10155 538 aaKnown RBP eCLIP26.14■■□□□ 1.78
CPNE1-216ENST00000437340 ALDH3A1P30838 453 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 OR1D2P34982 312 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 ADRA1AP35348 466 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 MPP3Q13368 585 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 PCID2Q5JVF3 399 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 RAP1GAP2Q684P5 730 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 PTCD2Q8WV60 388 aaKnown RBP26.14■■□□□ 1.78
CPNE1-216ENST00000437340 IGSF8Q969P0 613 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 ISL2Q96A47 359 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 MFSD3Q96ES6 412 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 RMDN2Q96LZ7 410 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 RBBP8Q99708 897 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 TSSK1BQ9BXA7 367 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 SLC25A51Q9H1U9 297 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 RETREG1Q9H6L5 497 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 CCSER2Q9H7U1 834 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 NSMCE4AQ9NXX6 385 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 ZNF212Q9UDV6 495 aa26.14■■□□□ 1.78
CPNE1-216ENST00000437340 BIRC5O15392 142 aa26.13■■□□□ 1.77
CPNE1-216ENST00000437340 CNTN5O94779 1100 aa26.13■■□□□ 1.77
CPNE1-216ENST00000437340 TGDSO95455 350 aa26.13■■□□□ 1.77
CPNE1-216ENST00000437340 MT-CYBP00156 380 aaPredicted RBP26.13■■□□□ 1.77
CPNE1-216ENST00000437340 ACRP10323 421 aa26.13■■□□□ 1.77
CPNE1-216ENST00000437340 NEFHP12036 1026 aa26.13■■□□□ 1.77
CPNE1-216ENST00000437340 TNK2Q07912 1038 aa26.13■■□□□ 1.77
CPNE1-216ENST00000437340 TEDDM1Q5T9Z0 273 aa26.13■■□□□ 1.77
CPNE1-216ENST00000437340 POTEHQ6S545 545 aa26.13■■□□□ 1.77
CPNE1-216ENST00000437340 TFAP2DQ7Z6R9 452 aa26.13■■□□□ 1.77
CPNE1-216ENST00000437340 KCNMB4Q86W47 210 aa26.13■■□□□ 1.77
CPNE1-216ENST00000437340 IPMKQ8NFU5 416 aa26.13■■□□□ 1.77
CPNE1-216ENST00000437340 HMCESQ96FZ2 354 aa26.13■■□□□ 1.77
CPNE1-216ENST00000437340 VN1R3Q9BXE9 311 aa26.13■■□□□ 1.77
CPNE1-216ENST00000437340 DOCK4Q8N1I0 1966 aa26.13■■□□□ 1.77
CPNE1-216ENST00000437340 NYNRINQ9P2P1 1898 aaKnown RBP26.13■■□□□ 1.77
CPNE1-216ENST00000437340 ABHD14A-ACY1A0A1B0GW23 586 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 TPP1O14773 563 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 GLRA3O75311 464 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 DNAJC8O75937 253 aaPredicted RBP26.12■■□□□ 1.77
CPNE1-216ENST00000437340 TPH1P17752 444 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 ATP5C1P36542 298 aaKnown RBP26.12■■□□□ 1.77
CPNE1-216ENST00000437340 MAPKAPK2P49137 400 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 CSE1LP55060 971 aaKnown RBP26.12■■□□□ 1.77
CPNE1-216ENST00000437340 PDE1BQ01064 536 aa26.12■■□□□ 1.77
CPNE1-216ENST00000437340 INSCQ1MX18 579 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms