RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 SOX17Q9H6I2 414 aaPredicted RBP11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 GID8Q9NWU2 228 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 COX16Q9P0S2 106 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 TLK1Q9UKI8 766 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 CNOT6Q9ULM6 557 aaKnown RBP11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 FADS3Q9Y5Q0 445 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 RBBP6Q7Z6E9 1792 aaKnown RBP11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 HEATR9A2RTY3 570 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 PRORSD1PA6NEY8 169 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 CFAP99D6REC4 459 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 LSM1O15116 133 aaKnown RBP11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 GRID2O43424 1007 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 IDO1P14902 403 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 ENPEPQ07075 957 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 PRPSAP1Q14558 356 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 RAB39AQ14964 217 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 XKR3Q5GH77 459 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 PERM1Q5SV97 790 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 HMBOX1Q6NT76 420 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 NANOGNBQ7Z5D8 188 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 IFNLR1Q8IU57 520 aaPredicted RBP11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 RTP4Q96DX8 246 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 MCRS1Q96EZ8 462 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 FBXL20Q96IG2 436 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 ANKRD36BP1Q96IX9 119 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 APOL2Q9BQE5 337 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 ELOVL4Q9GZR5 314 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 SMOXQ9NWM0 555 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 MTMR10Q9NXD2 777 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 CNOT11Q9UKZ1 510 aaKnown RBP11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 GREB1LQ9C091 1923 aaPredicted RBP11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 GCATO75600 419 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 PSMB4P28070 264 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 PTGER2P43116 358 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 NAMPTP43490 491 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 CSE1LP55060 971 aaKnown RBP11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 TREML2Q5T2D2 321 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 C12orf29Q8N999 325 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 OR52K1Q8NGK4 314 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 HTR3CQ8WXA8 447 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 ARNTL2Q8WYA1 636 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 PBXIP1Q96AQ6 731 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 SLCO4A1Q96BD0 722 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 FCRL3Q96P31 734 aaPredicted RBP11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 TMEM39BQ9GZU3 492 aa11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 DUS2Q9NX74 493 aaKnown RBP11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 RUVBL2Q9Y230 463 aaKnown RBP11.74□□□□□ -0.53
HMGCS1-202ENST00000433297 KDM1AO60341 852 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 GPD2P43304 727 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 ZNF362Q5T0B9 420 aaPredicted RBP11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 GRTP1Q5TC63 336 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 STRIP1Q5VSL9 837 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 TMEM176AQ96HP8 235 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 CNDP1Q96KN2 507 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 NPLQ9BXD5 320 aaPredicted RBP11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 B3GNT5Q9BYG0 378 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 PORCNQ9H237 461 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 SACM1LQ9NTJ5 587 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 PCDHGA7Q9Y5G6 932 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 TMEM114B3SHH9 223 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 GPC4O75487 556 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 ALDH1A2O94788 518 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 OXSR1O95747 527 aaPredicted RBP11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 HNRNPLP14866 589 aaKnown RBP eCLIP11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 NME5P56597 212 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 NHSL2Q5HYW2 709 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 FAM219BQ5XKK7 198 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 TMEM214Q6NUQ4 689 aaKnown RBP11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 KCTD8Q6ZWB6 473 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 PID1Q7Z2X4 250 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 TRPC4APQ8TEL6 797 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 ANKRD60Q9BZ19 345 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 XYLT2Q9H1B5 865 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 UPF3AQ9H1J1 476 aaKnown RBP11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 OXSMQ9NWU1 459 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 EGFL7Q9UHF1 273 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 DAPK2Q9UIK4 370 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 VPS28Q9UK41 221 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 GPR25O00155 361 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 CCND2P30279 289 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 SEMA5AQ13591 1074 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 TBCELQ5QJ74 424 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 RWDD4Q6NW29 188 aaKnown RBP11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 ILDR2Q71H61 639 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 CCDC80Q76M96 950 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 SPNS2Q8IVW8 549 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 PYROXD2Q8N2H3 581 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 MFSD3Q96ES6 412 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 CPNE1Q99829 537 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 GGA3Q9NZ52 723 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 TRPC5Q9UL62 973 aaPredicted RBP11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 RIPK3Q9Y572 518 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 GPC6Q9Y625 555 aaPredicted RBP11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 ADGRA2Q96PE1 1338 aa11.73□□□□□ -0.53
HMGCS1-202ENST00000433297 KCNK1O00180 336 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 CLOCKO15516 846 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 ITGB3P05106 788 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 TPH1P17752 444 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 MAGEA6P43360 314 aa11.72□□□□□ -0.53
HMGCS1-202ENST00000433297 CLCN2P51788 898 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms