RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 GMIPQ9P107 970 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.36□□□□□ -1.23
CNOT4-206ENST00000428680 DERAQ9Y315 318 aa7.36□□□□□ -1.23
CNOT4-206ENST00000428680 BAZ2BQ9UIF8 2168 aaKnown RBP7.35□□□□□ -1.23
CNOT4-206ENST00000428680 C1orf232A0A0U1RR37 186 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 ANKDD1BA6NHY2 528 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 O00370 1275 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 ATMINO43313 823 aaPredicted RBP7.35□□□□□ -1.23
CNOT4-206ENST00000428680 TYMPP19971 482 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 ZNF268Q14587 947 aaPredicted RBP7.35□□□□□ -1.23
CNOT4-206ENST00000428680 TFDP3Q5H9I0 405 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 ERMARDQ5T6L9 678 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 TMCO4Q5TGY1 634 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 C9orf57Q5W0N0 161 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 EFL1Q7Z2Z2 1120 aaKnown RBP7.35□□□□□ -1.23
CNOT4-206ENST00000428680 KRT222Q8N1A0 295 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 ANKRD52Q8NB46 1076 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 ST13P5Q8NFI4 369 aaPredicted RBP7.35□□□□□ -1.23
CNOT4-206ENST00000428680 FOXJ1Q92949 421 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 FERD3LQ96RJ6 166 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 P2RY13Q9BPV8 354 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 FAM126AQ9BYI3 521 aaPredicted RBP7.35□□□□□ -1.23
CNOT4-206ENST00000428680 FAM96AQ9H5X1 160 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 ARMC7Q9H6L4 198 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 ASB8Q9H765 288 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 CNOT10Q9H9A5 744 aaKnown RBP7.35□□□□□ -1.23
CNOT4-206ENST00000428680 FANCFQ9NPI8 374 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 SMIM22K7EJ46 135 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 TIMM44O43615 452 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 SKAP2O75563 359 aaPredicted RBP7.35□□□□□ -1.23
CNOT4-206ENST00000428680 ADH5P11766 374 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 TKTP29401 623 aaKnown RBP7.35□□□□□ -1.23
CNOT4-206ENST00000428680 CXCL12P48061 93 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 CLCN6P51797 869 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 ABCE1P61221 599 aaKnown RBP7.35□□□□□ -1.23
CNOT4-206ENST00000428680 PLEKHG6Q3KR16 790 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 ZC3H12BQ5HYM0 836 aaKnown RBP7.35□□□□□ -1.23
CNOT4-206ENST00000428680 ERMP1Q7Z2K6 904 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 LCA5Q86VQ0 697 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 FMR1NBQ8N0W7 255 aaPredicted RBP7.35□□□□□ -1.23
CNOT4-206ENST00000428680 FAM71DQ8N9W8 422 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 FAM46DQ8NEK8 389 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 RSPH9Q9H1X1 276 aaPredicted RBP7.35□□□□□ -1.23
CNOT4-206ENST00000428680 HCN3Q9P1Z3 774 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 RNF112Q9ULX5 631 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 POLR1DQ9Y2S0 133 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 A0A1W2PQ67 120 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 A0A1W2PQC6 194 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 CYTH3O43739 400 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 CDK14O94921 469 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 RPA3P35244 121 aaPredicted RBP7.35□□□□□ -1.23
CNOT4-206ENST00000428680 ATP1A2P50993 1020 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 CSTF1Q05048 431 aaKnown RBP7.35□□□□□ -1.23
CNOT4-206ENST00000428680 BTKQ06187 659 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 NDUFA9Q16795 377 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 KLHDC7AQ5VTJ3 777 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 C8orf33Q9H7E9 229 aaPredicted RBP7.35□□□□□ -1.23
CNOT4-206ENST00000428680 GDF3Q9NR23 364 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 AGPAT5Q9NUQ2 364 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 SIRPGQ9P1W8 387 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 FAM153AQ9UHL3 310 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 CDC23Q9UJX2 597 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 APOBEC2Q9Y235 224 aaKnown RBP7.35□□□□□ -1.23
CNOT4-206ENST00000428680 OR10H1Q9Y4A9 318 aa7.35□□□□□ -1.23
CNOT4-206ENST00000428680 MYADML2A6NDP7 307 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 EVPLLA8MZ36 301 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 E5RJQ4 531 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 ATG7O95352 703 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 PLEKP08567 350 aaPredicted RBP7.34□□□□□ -1.23
CNOT4-206ENST00000428680 HNRNPA1P09651 372 aaKnown RBP eCLIP7.34□□□□□ -1.23
CNOT4-206ENST00000428680 HNRNPH2P55795 449 aaKnown RBP7.34□□□□□ -1.23
CNOT4-206ENST00000428680 OCA2Q04671 838 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 INTS6LQ5JSJ4 861 aaKnown RBP7.34□□□□□ -1.23
CNOT4-206ENST00000428680 OR6K2Q8NGY2 324 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 SLC35G2Q8TBE7 412 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 AGR3Q8TD06 166 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 EDAQ92838 391 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 KLK6Q92876 244 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 STAMBPL1Q96FJ0 436 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 EXOC2Q96KP1 924 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 BBS4Q96RK4 519 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 OSBPL9Q96SU4 736 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 LHX5Q9H2C1 402 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 HPS4Q9NQG7 708 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 TRPC4Q9UBN4 977 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 XPO7Q9UIA9 1087 aaKnown RBP7.34□□□□□ -1.23
CNOT4-206ENST00000428680 PADI4Q9UM07 663 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 TRIM33Q9UPN9 1127 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 ERVK-11Q9UQG0 969 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 INVSQ9Y283 1065 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 YBX2Q9Y2T7 364 aaKnown RBP7.34□□□□□ -1.23
CNOT4-206ENST00000428680 USH1CQ9Y6N9 552 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 PIAS3Q9Y6X2 628 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 CLUHO75153 1309 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 GVINP1Q7Z2Y8 2422 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 CLDN5O00501 218 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 BAG2O95816 211 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 SOD2P04179 222 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 ITGA8P53708 1063 aa7.34□□□□□ -1.23
CNOT4-206ENST00000428680 DHX34Q14147 1143 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms