RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ZNF605Q86T29 641 aa17.13■□□□□ 0.33
MRPL55-220ENST00000411464 HORMAD1Q86X24 394 aa17.13■□□□□ 0.33
MRPL55-220ENST00000411464 ELOA2Q8IYF1 753 aaPredicted RBP17.13■□□□□ 0.33
MRPL55-220ENST00000411464 LSMEM2Q8N112 164 aa17.13■□□□□ 0.33
MRPL55-220ENST00000411464 ZNF248Q8NDW4 579 aa17.13■□□□□ 0.33
MRPL55-220ENST00000411464 TMIEQ8NEW7 156 aa17.13■□□□□ 0.33
MRPL55-220ENST00000411464 OR2A12Q8NGT7 310 aa17.13■□□□□ 0.33
MRPL55-220ENST00000411464 NOX5Q96PH1 765 aa17.13■□□□□ 0.33
MRPL55-220ENST00000411464 CPXM1Q96SM3 734 aa17.13■□□□□ 0.33
MRPL55-220ENST00000411464 C2orf49Q9BVC5 232 aaPredicted RBP17.13■□□□□ 0.33
MRPL55-220ENST00000411464 SRRTQ9BXP5 876 aaKnown RBP17.13■□□□□ 0.33
MRPL55-220ENST00000411464 ABCG4Q9H172 646 aa17.13■□□□□ 0.33
MRPL55-220ENST00000411464 NEMP2A6NFY4 417 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 M0QYT0 321 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 OPA1O60313 960 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 PAGE1O75459 146 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 FGFR1OPO95684 399 aaKnown RBP17.12■□□□□ 0.33
MRPL55-220ENST00000411464 MT-CO1P00395 513 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 PRNPP04156 253 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 CTSLP07711 333 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 CKMT1AP12532 417 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 SRCP12931 536 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 GGCXP38435 758 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 STX17P56962 302 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 ARHGAP44Q17R89 818 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 BROXQ5VW32 411 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 OR6B2Q6IFH4 312 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 C14orf80Q86SX3 495 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 WDTC1Q8N5D0 677 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 OR13H1Q8NG92 308 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 NAF1Q96HR8 494 aaKnown RBP17.12■□□□□ 0.33
MRPL55-220ENST00000411464 ZNF578Q96N58 590 aaPredicted RBP17.12■□□□□ 0.33
MRPL55-220ENST00000411464 DEPDC7Q96QD5 511 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 SYNCQ9H7C4 482 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 FZD3Q9NPG1 666 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 EVA1BQ9NVM1 165 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 PCDHB1Q9Y5F3 818 aa17.12■□□□□ 0.33
MRPL55-220ENST00000411464 SNAP91O60641 907 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 PIAS2O75928 621 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 MPOP05164 745 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 RHOCP08134 193 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 BMP6P22004 513 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 RECQLP46063 649 aaPredicted RBP17.11■□□□□ 0.33
MRPL55-220ENST00000411464 DUSP3P51452 185 aaPredicted RBP17.11■□□□□ 0.33
MRPL55-220ENST00000411464 PCBP4P57723 403 aaKnown RBP17.11■□□□□ 0.33
MRPL55-220ENST00000411464 CLDN2P57739 230 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 PAK1Q13153 545 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 C5orf22Q49AR2 442 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 TRIM65Q6PJ69 517 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 FAM183BPQ6ZVS7 135 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 ERN2Q76MJ5 926 aaKnown RBP17.11■□□□□ 0.33
MRPL55-220ENST00000411464 CREBRFQ8IUR6 639 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 PASD1Q8IV76 773 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 ZNF843Q8N446 348 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 FAM174AQ8TBP5 190 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 IFT43Q96FT9 208 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 CRACR2AQ9BSW2 395 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 OSBPL2Q9H1P3 480 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 WDCPQ9H6R7 721 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 NLGN3Q9NZ94 848 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 VPS51Q9UID3 782 aa17.11■□□□□ 0.33
MRPL55-220ENST00000411464 HELZ2Q9BYK8 2649 aaKnown RBP17.11■□□□□ 0.33
MRPL55-220ENST00000411464 CAPN8A6NHC0 703 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 BECN2A8MW95 431 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 K7ERQ8 282 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 BIN1O00499 593 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 USP12O75317 370 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 CNTN5O94779 1100 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 GP1BAP07359 652 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 RRM1P23921 792 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 NOS2P35228 1153 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 UCNP55089 124 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 SLC6A3Q01959 620 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 PTK2Q05397 1052 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 MORC3Q14149 939 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 ZNF542PQ5EBM4 170 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 ARSIQ5FYB1 569 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 CDCP2Q5VXM1 449 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 GJB7Q6PEY0 223 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 OLFML1Q6UWY5 402 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 LRRC31Q6UY01 552 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 Q6ZSR6 202 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 SETD3Q86TU7 594 aaPredicted RBP17.1■□□□□ 0.33
MRPL55-220ENST00000411464 DCP2Q8IU60 420 aaKnown RBP17.1■□□□□ 0.33
MRPL55-220ENST00000411464 ARRDC3Q96B67 414 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 PPP1R16AQ96I34 528 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 APOLD1Q96LR9 279 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 PSMB7Q99436 277 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 DUSP23Q9BVJ7 150 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 HDAC8Q9BY41 377 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 TKTL2Q9H0I9 626 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 USP29Q9HBJ7 922 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 DNAJC28Q9NX36 388 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 RRN3Q9NYV6 651 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 PCDHGC3Q9UN70 934 aa17.1■□□□□ 0.33
MRPL55-220ENST00000411464 A6NNZ2 444 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 SCAMP1O15126 338 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 SMAD6O43541 496 aaKnown RBP17.09■□□□□ 0.33
MRPL55-220ENST00000411464 DAB1O75553 588 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 MYF5P13349 255 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms