RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 PAXBP1Q9Y5B6 917 aa0.67□□□□□ -2.3
RNU6-554P-201ENST00000410466 MRFAP1Q9Y605 127 aa0.67□□□□□ -2.3
RNU6-554P-201ENST00000410466 CGNL1Q0VF96 1302 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 A0A0G2JPF8 293 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 KDM4EB2RXH2 506 aaPredicted RBP0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 HNRNPCL3B7ZW38 293 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 DVL1O14640 695 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 PCDH17O14917 1159 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 PI15O43692 258 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 HNRNPCL1O60812 293 aaKnown RBP0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 RASSF9O75901 435 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 HNRNPCL4P0DMR1 293 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 GNB3P16520 340 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 DRD1P21728 446 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 SSTR2P30874 369 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 FMO4P31512 558 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 RPL3P39023 403 aaKnown RBP0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 PBX1P40424 430 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 DVL1P1P54792 670 aaPredicted RBP0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 PITX1P78337 314 aaPredicted RBP0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 SF3A1Q15459 793 aaKnown RBP0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 SFMBT2Q5VUG0 894 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 ZNF613Q6PF04 617 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 APLFQ8IW19 511 aaPredicted RBP0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 DSELQ8IZU8 1212 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 MIER2Q8N344 545 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 UBR7Q8N806 425 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 KLHDC9Q8NEP7 349 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 GLMPQ8WWB7 406 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 UBXN4Q92575 508 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 CDK5RAP3Q96JB5 506 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 CTRCQ99895 268 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 PLEKHA4Q9H4M7 779 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 ACTR5Q9H9F9 607 aaPredicted RBP0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 A1CFQ9NQ94 594 aaKnown RBP0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 GPR83Q9NYM4 423 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 SIX4Q9UIU6 781 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 KLK13Q9UKR3 277 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 DAAM1Q9Y4D1 1078 aa0.66□□□□□ -2.3
RNU6-554P-201ENST00000410466 GPR39O43194 453 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 TIPRLO75663 272 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 GAGE7O76087 117 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 MT-CO1P00395 513 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 LINC00271P0C7V0 271 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 GAGE12FP0CL80 117 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 GAGE12GP0CL81 117 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 GAGE12IP0CL82 117 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 CPEP16870 476 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 SOX5P35711 763 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 STAT1P42224 750 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 ARFIP2P53365 341 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 ADPRHP54922 357 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 ECT2LQ008S8 904 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 GAGE1Q13065 139 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 GAGE4Q13068 117 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 IRAK1BP1Q5VVH5 260 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 ACSM6Q6P461 480 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 ATP11CQ8NB49 1132 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 LSM14AQ8ND56 463 aaKnown RBP0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 OR56A3Q8NH54 315 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 AGAP3Q96P47 875 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 SLC52A3Q9NQ40 469 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 PRDM8Q9NQV8 689 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 ZNF624Q9P2J8 865 aaPredicted RBP0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 CACNG5Q9UF02 275 aa0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 RALYQ9UKM9 306 aaKnown RBP0.65□□□□□ -2.31
RNU6-554P-201ENST00000410466 A0A087X002 238 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 ASPDHA6ND91 283 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 SMIM1B2RUZ4 78 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 RAB27BO00194 218 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 PCDHGA12O60330 932 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 CDC45O75419 566 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 IL18RAPO95256 599 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 UNGP13051 313 aaPredicted RBP0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 TPH1P17752 444 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 PRPH2P23942 346 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 CPT1AP50416 773 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 SLC37A1P57057 533 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 SEMA3BQ13214 749 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 CCNYL2Q5T2Q4 361 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 DOK6Q6PKX4 331 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 LHFPL2Q6ZUX7 228 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 ADPRHL1Q8NDY3 354 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 SRFBP1Q8NEF9 429 aaKnown RBP0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 SUN3Q8TAQ9 357 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 ZNRF4Q8WWF5 429 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 CPT1BQ92523 772 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 IP6K1Q92551 441 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 FAXDC2Q96IV6 333 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 ADAD1Q96M93 576 aaKnown RBP0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 DPH1Q9BZG8 443 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 RTN4RQ9BZR6 473 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 ARMT1Q9H993 441 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 FAF1Q9UNN5 650 aaPredicted RBP0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 MRPS28Q9Y2Q9 187 aaKnown RBP0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 PCDHGA9Q9Y5G4 932 aaKnown RBP0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 PCDHGA8Q9Y5G5 932 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 PCDHGA7Q9Y5G6 932 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 PCDHGA6Q9Y5G7 932 aa0.64□□□□□ -2.31
RNU6-554P-201ENST00000410466 PCDHGA3Q9Y5H0 932 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms