RNA–Protein interactions for RNA: ENST00000409299.7

PXMP4-203, Transcript of peroxisomal membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PXMP4, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-203ENST00000409299 MIEF1Q9NQG6 463 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 UBR1Q8IWV7 1749 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 ASTN1O14525 1302 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 SF3B1O75533 1304 aaKnown RBP eCLIP12.37□□□□□ -0.43
PXMP4-203ENST00000409299 NPM3O75607 178 aaKnown RBP12.37□□□□□ -0.43
PXMP4-203ENST00000409299 EPB42P16452 691 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 DRD4P21917 467 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 SLC16A1P53985 500 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 CREMQ03060 361 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 ITGA7Q13683 1181 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 ARMC4Q5T2S8 1044 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 RD3Q7Z3Z2 195 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 ZNF438Q7Z4V0 828 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 MILR1Q7Z6M3 343 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 SLAIN1Q8ND83 568 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 LNX1Q8TBB1 728 aaPredicted RBP12.37□□□□□ -0.43
PXMP4-203ENST00000409299 FAM45AQ8TCE6 357 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 BAP1Q92560 729 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 HMG20AQ9NP66 347 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 RAD18Q9NS91 495 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 PADI4Q9UM07 663 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 NCKAP1Q9Y2A7 1128 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 UBIAD1Q9Y5Z9 338 aa12.37□□□□□ -0.43
PXMP4-203ENST00000409299 RBAK-RBAKDNI3L0D1 243 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 LTA4HP09960 611 aaKnown RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 BNIP2Q12982 314 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 PABPC1LQ4VXU2 614 aaKnown RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 TFAP2DQ7Z6R9 452 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 CLVS1Q8IUQ0 354 aaPredicted RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 ZNF557Q8N988 423 aaPredicted RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 CDHR5Q9HBB8 845 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 ST3GAL5Q9UNP4 418 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 HES2Q9Y543 173 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 SMIM22K7EJ46 135 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 ABLIM1O14639 778 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 WBP4O75554 376 aaKnown RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 RECQL5O94762 991 aaPredicted RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 CYP2A6P11509 494 aaPredicted RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 LBPP18428 481 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 PTPN3P26045 913 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 NOS2P35228 1153 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 CLCN5P51795 746 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 CDH8P55286 799 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 RPS7P62081 194 aaKnown RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 PLCL1Q15111 1095 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 WDR59Q6PJI9 974 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 PLPPR4Q7Z2D5 763 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 FGD2Q7Z6J4 655 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 RBM23Q86U06 439 aaKnown RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 FAM126BQ8IXS8 530 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 DEFB106AQ8N104 65 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 ST13P5Q8NFI4 369 aaPredicted RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 GAS2L1Q99501 681 aaPredicted RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 SLC28A3Q9HAS3 691 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 SLIT3O75094 1523 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 KCNH1O95259 989 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 TRUB2O95900 331 aaKnown RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 RBL1P28749 1068 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 TUBP50607 506 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 PHKG1Q16816 387 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 TRIQKQ629K1 86 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 ZDHHC13Q8IUH4 622 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 B3GALNT2Q8NCR0 500 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 RP9Q8TA86 221 aaKnown RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.431e-6■■■■■ 33.1
PXMP4-203ENST00000409299 CORO1BQ9BR76 489 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 OSBPL10Q9BXB5 764 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 MTF2Q9Y483 593 aaPredicted RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 SMIM31A0A1B0GVY4 71 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 PSMD10O75832 226 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 CCDC130P13994 396 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 DCTN2Q13561 401 aaKnown RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 FAM187BQ17R55 369 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 USP39Q53GS9 565 aaKnown RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 C8orf59Q8N0T1 100 aaPredicted RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 LGI2Q8N0V4 545 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 NKAPQ8N5F7 415 aaKnown RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 ZNF670Q9BS34 389 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 ZCWPW1Q9H0M4 648 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 ATP13A1Q9HD20 1204 aa12.36□□□□□ -0.43
PXMP4-203ENST00000409299 MRPS23Q9Y3D9 190 aaKnown RBP12.36□□□□□ -0.43
PXMP4-203ENST00000409299 PHLPP1O60346 1717 aa12.35□□□□□ -0.43
PXMP4-203ENST00000409299 SERPINA6P08185 405 aa12.35□□□□□ -0.43
PXMP4-203ENST00000409299 YBX3P16989 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
PXMP4-203ENST00000409299 OR1E1P30953 314 aa12.35□□□□□ -0.43
PXMP4-203ENST00000409299 TNK2Q07912 1038 aa12.35□□□□□ -0.43
PXMP4-203ENST00000409299 TRAF3Q13114 568 aa12.35□□□□□ -0.43
PXMP4-203ENST00000409299 TPGS1Q6ZTW0 290 aa12.35□□□□□ -0.43
PXMP4-203ENST00000409299 C7orf61Q8IZ16 206 aa12.35□□□□□ -0.43
PXMP4-203ENST00000409299 ZNF513Q8N8E2 541 aaPredicted RBP12.35□□□□□ -0.43
PXMP4-203ENST00000409299 PHF21BQ96EK2 531 aa12.35□□□□□ -0.43
PXMP4-203ENST00000409299 SEPHS2Q99611 448 aa12.35□□□□□ -0.43
PXMP4-203ENST00000409299 SERHL2Q9H4I8 314 aa12.35□□□□□ -0.43
PXMP4-203ENST00000409299 SERHLQ9NQF3 203 aa12.35□□□□□ -0.43
PXMP4-203ENST00000409299 TRIM38O00635 465 aa12.35□□□□□ -0.43
PXMP4-203ENST00000409299 OPLAHO14841 1288 aa12.35□□□□□ -0.43
PXMP4-203ENST00000409299 DCXO43602 365 aa12.35□□□□□ -0.43
PXMP4-203ENST00000409299 SMNDC1O75940 238 aaKnown RBP eCLIP12.35□□□□□ -0.43
PXMP4-203ENST00000409299 RPN2P04844 631 aa12.35□□□□□ -0.43
PXMP4-203ENST00000409299 SERPINH1P50454 418 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms