RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 PPP1R10Q96QC0 940 aaKnown RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 KLF6Q99612 283 aaPredicted RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 PRMT1Q99873 361 aaKnown RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 PACSIN1Q9BY11 444 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 SHCBP1LQ9BZQ2 653 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 ROPN1BQ9BZX4 212 aaPredicted RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 ROPN1Q9HAT0 212 aaPredicted RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 IL1RL2Q9HB29 575 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 AVENQ9NQS1 362 aaPredicted RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 RBM12Q9NTZ6 932 aaKnown RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 COMMD8Q9NX08 183 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 TMCO1Q9UM00 188 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 ASTN1O14525 1302 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 A0A087X0T9 212 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 A0A087X1B8 175 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 BTN3A1O00481 513 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 MSI1O43347 362 aaKnown RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 OR10H2O60403 315 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 B4GALT4O60513 344 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 FAM228BP0C875 321 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 HLA-DPA1P20036 260 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 RRM2P31350 389 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 FLOT2Q14254 428 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 ZSCAN26Q16670 478 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 NDUFA9Q16795 377 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 C15orf59Q2T9L4 293 aaPredicted RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 PARP15Q460N3 678 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 AASDHQ4L235 1098 aaPredicted RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 TMEM164Q5U3C3 297 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 ZNF470Q6ECI4 717 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 LVRNQ6Q4G3 990 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 FBXO39Q8N4B4 442 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 OR5B17Q8NGF7 314 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 CPNE1Q99829 537 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 HSD17B14Q9BPX1 270 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 ECSITQ9BQ95 431 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 WHRNQ9P202 907 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 COL20A1Q9P218 1284 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 PLIN4Q96Q06 1357 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 SALL3Q9BXA9 1300 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 KLRG2A4D1S0 409 aaPredicted RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 MDM4O15151 490 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 KRT33AO76009 404 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 GLI1P08151 1106 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 SPATA31C1P0DKV0 1188 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 JAK1P23458 1154 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 MATKP42679 507 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 SLC16A1P53985 500 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 ILF3Q12906 894 aaKnown RBP eCLIP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 PDGFRLQ15198 375 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 KBTBD12Q3ZCT8 623 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 CYB5D1Q6P9G0 228 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 WDR59Q6PJI9 974 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 MILR1Q7Z6M3 343 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 CENPLQ8N0S6 344 aaPredicted RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 SIX5Q8N196 739 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 TC2NQ8N9U0 490 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 OR56A4Q8NGH8 313 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 SETD7Q8WTS6 366 aaKnown RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 METTL21AQ8WXB1 218 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 MFSD14AQ96MC6 490 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 FAIM2Q9BWQ8 316 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 MCOLN1Q9GZU1 580 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 ILKAPQ9H0C8 392 aaPredicted RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 ACTR5Q9H9F9 607 aaPredicted RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 RRAGDQ9NQL2 400 aaPredicted RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 IMP3Q9NV31 184 aaKnown RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 MARCOQ9UEW3 520 aaPredicted RBP5.09□□□□□ -1.59
SCN3A-203ENST00000409101 TBC1D30Q9Y2I9 924 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 PCDHA3Q9Y5H8 950 aa5.09□□□□□ -1.59
SCN3A-203ENST00000409101 LAMTOR5O43504 91 aa5.09□□□□□ -1.6
SCN3A-203ENST00000409101 KLHL2O95198 593 aa5.09□□□□□ -1.6
SCN3A-203ENST00000409101 ENO1P06733 434 aaKnown RBP5.09□□□□□ -1.6
SCN3A-203ENST00000409101 COX7A2P14406 83 aa5.09□□□□□ -1.6
SCN3A-203ENST00000409101 SERPINB4P48594 390 aa5.09□□□□□ -1.6
SCN3A-203ENST00000409101 CLCN6P51797 869 aa5.09□□□□□ -1.6
SCN3A-203ENST00000409101 PPP3CAQ08209 521 aa5.09□□□□□ -1.6
SCN3A-203ENST00000409101 GALNT3Q14435 633 aa5.09□□□□□ -1.6
SCN3A-203ENST00000409101 FIGNQ5HY92 759 aa5.09□□□□□ -1.6
SCN3A-203ENST00000409101 PCID2Q5JVF3 399 aa5.09□□□□□ -1.6
SCN3A-203ENST00000409101 FAM228AQ86W67 206 aa5.09□□□□□ -1.6
SCN3A-203ENST00000409101 TMEM192Q8IY95 271 aa5.09□□□□□ -1.6
SCN3A-203ENST00000409101 C12orf29Q8N999 325 aa5.09□□□□□ -1.6
SCN3A-203ENST00000409101 SCAIQ8N9R8 606 aa5.09□□□□□ -1.6
SCN3A-203ENST00000409101 SH3RF2Q8TEC5 729 aa5.09□□□□□ -1.6
SCN3A-203ENST00000409101 REXO5Q96IC2 774 aaKnown RBP5.09□□□□□ -1.6
SCN3A-203ENST00000409101 FCRL2Q96LA5 508 aaPredicted RBP5.09□□□□□ -1.6
SCN3A-203ENST00000409101 SEMA3CQ99985 751 aa5.09□□□□□ -1.6
SCN3A-203ENST00000409101 MANSC1Q9H8J5 431 aa5.09□□□□□ -1.6
SCN3A-203ENST00000409101 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.09□□□□□ -1.6
SCN3A-203ENST00000409101 ANKRD26Q9UPS8 1709 aa5.09□□□□□ -1.6
SCN3A-203ENST00000409101 A0A1W2PRU2 124 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 EIF3HO15372 352 aaKnown RBP eCLIP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 HOXB8P17481 243 aaPredicted RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 PMS1P54277 932 aaKnown RBP5.08□□□□□ -1.6
SCN3A-203ENST00000409101 ABRQ12979 859 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 ATP6AP1LQ52LC2 224 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 ARMCX6Q7L4S7 300 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 CDK20Q8IZL9 346 aa5.08□□□□□ -1.6
SCN3A-203ENST00000409101 EFCAB3Q8N7B9 438 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms