RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 PPHLN1Q8NEY8 458 aaKnown RBP18.03■□□□□ 0.48
HLA-DQB1-204ENST00000399084 SPPL2BQ8TCT7 592 aa18.03■□□□□ 0.48
HLA-DQB1-204ENST00000399084 CELF6Q96J87 481 aaKnown RBP18.03■□□□□ 0.48
HLA-DQB1-204ENST00000399084 BTN2A3PQ96KV6 586 aa18.03■□□□□ 0.48
HLA-DQB1-204ENST00000399084 ANKRD27Q96NW4 1050 aa18.03■□□□□ 0.48
HLA-DQB1-204ENST00000399084 MECRQ9BV79 373 aa18.03■□□□□ 0.48
HLA-DQB1-204ENST00000399084 UBE2OQ9C0C9 1292 aaKnown RBP18.03■□□□□ 0.48
HLA-DQB1-204ENST00000399084 RHOJQ9H4E5 214 aa18.03■□□□□ 0.48
HLA-DQB1-204ENST00000399084 STARD7Q9NQZ5 370 aa18.03■□□□□ 0.48
HLA-DQB1-204ENST00000399084 ABI2Q9NYB9 513 aaPredicted RBP18.03■□□□□ 0.48
HLA-DQB1-204ENST00000399084 SFMBT1Q9UHJ3 866 aa18.03■□□□□ 0.48
HLA-DQB1-204ENST00000399084 SNX10Q9Y5X0 201 aa18.03■□□□□ 0.48
HLA-DQB1-204ENST00000399084 HS3ST4Q9Y661 456 aa18.03■□□□□ 0.48
HLA-DQB1-204ENST00000399084 IGLV3-10A0A075B6K4 115 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 ARVCFO00192 962 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 ATP9BO43861 1147 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 USP12O75317 370 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 NEBLO76041 1014 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 ALDH2P05091 517 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 SERPINA6P08185 405 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 YWHAQP27348 245 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 ADRA1AP35348 466 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 SLC1A6P48664 564 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 HARS2P49590 506 aaKnown RBP18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 PRMT2P55345 433 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 TBX4P57082 545 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 RING1Q06587 406 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 TRIP4Q15650 581 aaPredicted RBP18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 PREPLQ4J6C6 727 aaPredicted RBP18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 HSP90AA5PQ58FG0 334 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 ARTNQ5T4W7 220 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 CLEC14AQ86T13 490 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 OR6Y1Q8NGX8 325 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 RAET1EQ8TD07 263 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 GPR22Q99680 433 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 ZYG11BQ9C0D3 744 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 SLC25A51Q9H1U9 297 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 NMUR1Q9HB89 426 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 TLR8Q9NR97 1041 aaKnown RBP18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 CHRAC1Q9NRG0 131 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 TMEM248Q9NWD8 314 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 OSER1Q9NX31 292 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 STK38LQ9Y2H1 464 aa18.02■□□□□ 0.48
HLA-DQB1-204ENST00000399084 TMEM114B3SHH9 223 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 FCHO1O14526 889 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 HGSO14964 777 aaPredicted RBP18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 ESRRAP11474 423 aaPredicted RBP18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 FGF3P11487 239 aaPredicted RBP18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 FGFR3P22607 806 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 BTG3Q14201 252 aaPredicted RBP18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 MBTPS1Q14703 1052 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 CTXN3Q4LDR2 81 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 RANBP10Q6VN20 620 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 STON2Q8WXE9 905 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 LINC01599Q8WXQ3 324 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 MFSD3Q96ES6 412 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 TSNARE1Q96NA8 513 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 CDK5RAP1Q96SZ6 601 aaKnown RBP18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 TMEM175Q9BSA9 504 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 MRPL9Q9BYD2 267 aaKnown RBP18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 HMX1Q9NP08 348 aaPredicted RBP18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 RBM22Q9NW64 420 aaKnown RBP eCLIP18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 PIH1D1Q9NWS0 290 aaKnown RBP18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 IPO11Q9UI26 975 aaKnown RBP18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 PCDHB7Q9Y5E2 793 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 PLXNA3P51805 1871 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 A0A1W2PQ45 241 aaPredicted RBP18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 A0A1W2PQY0 241 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 KLHL2O95198 593 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 CBX6O95503 412 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 RALBP11234 206 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 ALOX15P16050 662 aaPredicted RBP18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 CSRP3P50461 194 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 GPR17Q13304 367 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 LAMB3Q13751 1172 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 PCLAFQ15004 111 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 KIAA0408Q6ZU52 694 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 LRRC8DQ7L1W4 858 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 NSMCE1Q8WV22 266 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 RANBP9Q96S59 729 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 PRDM5Q9NQX1 630 aaPredicted RBP18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 TLK1Q9UKI8 766 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 TRIM33Q9UPN9 1127 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 PHF24Q9UPV7 400 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 APOBEC2Q9Y235 224 aaKnown RBP18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 CDY1Q9Y6F8 540 aa18.01■□□□□ 0.47
HLA-DQB1-204ENST00000399084 FNDC1Q4ZHG4 1894 aaPredicted RBP18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 NUP205Q92621 2012 aa18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 A0A096LPK6 155 aa18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 PAPOLAP51003 745 aaKnown RBP18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 YBEYP58557 167 aaPredicted RBP18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 RPL10AP62906 217 aaKnown RBP18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 ASPHQ12797 758 aa18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 CES3Q6UWW8 571 aa18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 OTOP3Q7RTS5 596 aa18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 LONP2Q86WA8 852 aa18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 LMNTD2Q8IXW0 634 aa18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 ZNF683Q8IZ20 524 aa18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 SLAIN1Q8ND83 568 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms