RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 KLHL10Q6JEL2 608 aa16.54■□□□□ 0.24
CUX2-202ENST00000397643 IGF2-ASQ6U949 168 aa16.54■□□□□ 0.24
CUX2-202ENST00000397643 LSMEM2Q8N112 164 aa16.54■□□□□ 0.24
CUX2-202ENST00000397643 KLK6Q92876 244 aa16.54■□□□□ 0.24
CUX2-202ENST00000397643 APOLD1Q96LR9 279 aa16.54■□□□□ 0.24
CUX2-202ENST00000397643 NT5C1BQ96P26 610 aa16.54■□□□□ 0.24
CUX2-202ENST00000397643 SLC4A5Q9BY07 1137 aa16.54■□□□□ 0.24
CUX2-202ENST00000397643 ARMCX3Q9UH62 379 aaPredicted RBP16.54■□□□□ 0.24
CUX2-202ENST00000397643 A0A1W2PQU0 124 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 BICDL2A1A5D9 508 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 TRIM49BA6NDI0 452 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 C1QTNF3-AMACRE9PGA6 284 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 PYCARD-AS1I3L0S3 204 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 RNF103O00237 685 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 KLK10O43240 276 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 SKOR1P84550 965 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 PAK1Q13153 545 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 TTC39BQ5VTQ0 682 aaPredicted RBP16.53■□□□□ 0.24
CUX2-202ENST00000397643 FBXL22Q6P050 247 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 GCNT7Q6ZNI0 430 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 PPM1KQ8N3J5 372 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 SH2D3CQ8N5H7 860 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 FAM181AQ8N9Y4 354 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 NELFBQ8WX92 580 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 VCPIP1Q96JH7 1222 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 FEM1AQ9BSK4 669 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 ANP32EQ9BTT0 268 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 POPDC2Q9HBU9 364 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 ST7Q9NRC1 585 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 GPR27Q9NS67 375 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 NLGN3Q9NZ94 848 aa16.53■□□□□ 0.24
CUX2-202ENST00000397643 ZFR2Q9UPR6 939 aaKnown RBP16.53■□□□□ 0.24
CUX2-202ENST00000397643 PTPN13Q12923 2485 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 B8ZZF3 427 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 E5RJQ4 531 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 C6P13671 934 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 ERCC5P28715 1186 aaPredicted RBP16.52■□□□□ 0.24
CUX2-202ENST00000397643 ACADSBP45954 432 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 CLDN2P57739 230 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 LRRC63Q05C16 580 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 VAC14Q08AM6 782 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 TAF5Q15542 800 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 ACCSLQ4AC99 568 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 HS1BP3Q53T59 392 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 NEK5Q6P3R8 708 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 DENND1BQ6P3S1 775 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 ABI3BPQ7Z7G0 1075 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 HORMAD1Q86X24 394 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 ARHGEF19Q8IW93 802 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 ATP6V0D2Q8N8Y2 350 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 ARRDC3Q96B67 414 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 KREMEN1Q96MU8 473 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 TRIM62Q9BVG3 475 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 CALN1Q9BXU9 219 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 DPH1Q9BZG8 443 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 NAT10Q9H0A0 1025 aaKnown RBP16.52■□□□□ 0.24
CUX2-202ENST00000397643 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.52■□□□□ 0.24
CUX2-202ENST00000397643 RWDD2AQ9UIY3 292 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 SLC25A13Q9UJS0 675 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 CNTN6Q9UQ52 1028 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 CTNND2Q9UQB3 1225 aa16.52■□□□□ 0.24
CUX2-202ENST00000397643 BSNQ9UPA5 3926 aa16.51■□□□□ 0.23
CUX2-202ENST00000397643 K7ESM1 405 aa16.51■□□□□ 0.23
CUX2-202ENST00000397643 SCAMP1O15126 338 aa16.51■□□□□ 0.23
CUX2-202ENST00000397643 NEBLO76041 1014 aa16.51■□□□□ 0.23
CUX2-202ENST00000397643 HNRNPA2B1P22626 353 aaKnown RBP16.51■□□□□ 0.23
CUX2-202ENST00000397643 OXCT1P55809 520 aa16.51■□□□□ 0.23
CUX2-202ENST00000397643 YWHAZP63104 245 aaKnown RBP16.51■□□□□ 0.23
CUX2-202ENST00000397643 ISXQ2M1V0 245 aa16.51■□□□□ 0.23
CUX2-202ENST00000397643 RABGAP1LQ5R372 815 aa16.51■□□□□ 0.23
CUX2-202ENST00000397643 FOXR2Q6PJQ5 311 aa16.51■□□□□ 0.23
CUX2-202ENST00000397643 RRAGAQ7L523 313 aa16.51■□□□□ 0.23
CUX2-202ENST00000397643 TMEM110Q86TL2 294 aa16.51■□□□□ 0.23
CUX2-202ENST00000397643 STK32AQ8WU08 396 aa16.51■□□□□ 0.23
CUX2-202ENST00000397643 IFT43Q96FT9 208 aa16.51■□□□□ 0.23
CUX2-202ENST00000397643 PRR11Q96HE9 360 aaPredicted RBP16.51■□□□□ 0.23
CUX2-202ENST00000397643 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.51■□□□□ 0.23
CUX2-202ENST00000397643 USP29Q9HBJ7 922 aa16.51■□□□□ 0.23
CUX2-202ENST00000397643 METTL14Q9HCE5 456 aaKnown RBP16.51■□□□□ 0.23
CUX2-202ENST00000397643 THSD1Q9NS62 852 aa16.51■□□□□ 0.23
CUX2-202ENST00000397643 HS3ST2Q9Y278 367 aa16.51■□□□□ 0.23
CUX2-202ENST00000397643 MT-CO1P00395 513 aa16.5■□□□□ 0.23
CUX2-202ENST00000397643 ALPPL2P10696 532 aa16.5■□□□□ 0.23
CUX2-202ENST00000397643 SRCP12931 536 aa16.5■□□□□ 0.23
CUX2-202ENST00000397643 ZNF18P17022 549 aa16.5■□□□□ 0.23
CUX2-202ENST00000397643 TGM2P21980 687 aa16.5■□□□□ 0.23
CUX2-202ENST00000397643 AKT2P31751 481 aa16.5■□□□□ 0.23
CUX2-202ENST00000397643 GCNT1Q02742 428 aa16.5■□□□□ 0.23
CUX2-202ENST00000397643 AUHQ13825 339 aaKnown RBP16.5■□□□□ 0.23
CUX2-202ENST00000397643 MEA1Q16626 185 aa16.5■□□□□ 0.23
CUX2-202ENST00000397643 KIF26BQ2KJY2 2108 aa16.5■□□□□ 0.23
CUX2-202ENST00000397643 TMEM259Q4ZIN3 620 aa16.5■□□□□ 0.23
CUX2-202ENST00000397643 ZNF542PQ5EBM4 170 aa16.5■□□□□ 0.23
CUX2-202ENST00000397643 SEL1L3Q68CR1 1132 aa16.5■□□□□ 0.23
CUX2-202ENST00000397643 OR2A12Q8NGT7 310 aa16.5■□□□□ 0.23
CUX2-202ENST00000397643 IFI44Q8TCB0 444 aa16.5■□□□□ 0.23
CUX2-202ENST00000397643 RPRD1AQ96P16 312 aaPredicted RBP16.5■□□□□ 0.23
CUX2-202ENST00000397643 FUCA2Q9BTY2 467 aa16.5■□□□□ 0.23
CUX2-202ENST00000397643 OSBPL2Q9H1P3 480 aa16.5■□□□□ 0.23
CUX2-202ENST00000397643 THAP9Q9H5L6 903 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms