RNA–Protein interactions for RNA: ENST00000396182.6

PDE1C-202, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 2,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-202ENST00000396182 FAM124BQ9H5Z6 455 aaPredicted RBP16.35■□□□□ 0.21
PDE1C-202ENST00000396182 ZNF385DQ9H6B1 395 aa16.35■□□□□ 0.21
PDE1C-202ENST00000396182 IGSF5Q9NSI5 407 aa16.35■□□□□ 0.21
PDE1C-202ENST00000396182 TXNDC16Q9P2K2 825 aa16.35■□□□□ 0.21
PDE1C-202ENST00000396182 EPS15L1Q9UBC2 864 aa16.35■□□□□ 0.21
PDE1C-202ENST00000396182 RBPJLQ9UBG7 517 aa16.35■□□□□ 0.21
PDE1C-202ENST00000396182 C7orf72A4D263 438 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.34■□□□□ 0.21
PDE1C-202ENST00000396182 MATN2O00339 956 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 LGALS2P05162 132 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 PPARGP37231 505 aaPredicted RBP16.34■□□□□ 0.21
PDE1C-202ENST00000396182 PLOD1Q02809 727 aaPredicted RBP16.34■□□□□ 0.21
PDE1C-202ENST00000396182 MGAT5BQ3V5L5 792 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 DHRS4L2Q6PKH6 230 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 TRIML2Q8N7C3 387 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 SNTG2Q9NY99 539 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 CITO14578 2027 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 CHRNGP07510 517 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 LMO2P25791 158 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 GARSP41250 739 aaKnown RBP16.34■□□□□ 0.21
PDE1C-202ENST00000396182 PITX1P78337 314 aaPredicted RBP16.34■□□□□ 0.21
PDE1C-202ENST00000396182 TTLL4Q14679 1199 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 KCTD2Q14681 263 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 NRF1Q16656 503 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 KYAT1Q16773 422 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 GLRA4Q5JXX5 417 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 CPSF7Q8N684 471 aaKnown RBP16.34■□□□□ 0.21
PDE1C-202ENST00000396182 EME1Q96AY2 570 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 ZNF597Q96LX8 424 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 FAIMQ9NVQ4 179 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 TBCCD1Q9NVR7 557 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 ARHGEF38Q9NXL2 777 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 GJD2Q9UKL4 321 aa16.34■□□□□ 0.21
PDE1C-202ENST00000396182 HACD1B0YJ81 288 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 XPO1O14980 1071 aaKnown RBP16.33■□□□□ 0.2
PDE1C-202ENST00000396182 SLC22A2O15244 555 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 TRIM13O60858 407 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 H6PDO95479 791 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 LTFP02788 710 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 ZNF286BP0CG31 522 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 ARL4AP40617 200 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 IRF9Q00978 393 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 ARHGAP1Q07960 439 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 ARHGAP17Q68EM7 881 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 SETD3Q86TU7 594 aaPredicted RBP16.33■□□□□ 0.2
PDE1C-202ENST00000396182 CARM1Q86X55 608 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 NT5DC4Q86YG4 428 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 SMYD1Q8NB12 490 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 CCNYQ8ND76 341 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 GRIN3AQ8TCU5 1115 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 GATA5Q9BWX5 397 aaPredicted RBP16.33■□□□□ 0.2
PDE1C-202ENST00000396182 FZD10Q9ULW2 581 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 FAF1Q9UNN5 650 aaPredicted RBP16.33■□□□□ 0.2
PDE1C-202ENST00000396182 HES2Q9Y543 173 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 POLR2AP24928 1970 aaKnown RBP16.33■□□□□ 0.2
PDE1C-202ENST00000396182 PAPPA2Q9BXP8 1791 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 SYNJ2BP-COX16A0A087WUM0 186 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 ARHGEF37A1IGU5 675 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 KPNA7A9QM74 516 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 HDAC3O15379 428 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 SLC25A27O95847 323 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 NELFEP18615 380 aaKnown RBP16.33■□□□□ 0.2
PDE1C-202ENST00000396182 GRM5P41594 1212 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 SNX16P57768 344 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 BST2Q10589 180 aaKnown RBP16.33■□□□□ 0.2
PDE1C-202ENST00000396182 HERC3Q15034 1050 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 IL23RQ5VWK5 629 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 TMEM198Q66K66 360 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 CLEC14AQ86T13 490 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 ZNF567Q8N184 647 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 ANKRD52Q8NB46 1076 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 MOCOSQ96EN8 888 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 CERS2Q96G23 380 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 OTUD5Q96G74 571 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 CPNE1Q99829 537 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 ILKAPQ9H0C8 392 aaPredicted RBP16.33■□□□□ 0.2
PDE1C-202ENST00000396182 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.33■□□□□ 0.2
PDE1C-202ENST00000396182 COX16Q9P0S2 106 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 ZNHIT2Q9UHR6 403 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 ADAM28Q9UKQ2 775 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 TDRKHQ9Y2W6 561 aaKnown RBP16.33■□□□□ 0.2
PDE1C-202ENST00000396182 SH3GLB1Q9Y371 365 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 SQORQ9Y6N5 450 aa16.33■□□□□ 0.2
PDE1C-202ENST00000396182 H0YJX3 145 aa16.32■□□□□ 0.2
PDE1C-202ENST00000396182 H3BNH8 94 aa16.32■□□□□ 0.2
PDE1C-202ENST00000396182 USP12O75317 370 aa16.32■□□□□ 0.2
PDE1C-202ENST00000396182 VAPBO95292 243 aa16.32■□□□□ 0.2
PDE1C-202ENST00000396182 ZBTB7AO95365 584 aa16.32■□□□□ 0.2
PDE1C-202ENST00000396182 ABCG1P45844 678 aa16.32■□□□□ 0.2
PDE1C-202ENST00000396182 STT3AP46977 705 aa16.32■□□□□ 0.2
PDE1C-202ENST00000396182 CBX3Q13185 183 aa16.32■□□□□ 0.2
PDE1C-202ENST00000396182 DPYSQ14117 519 aa16.32■□□□□ 0.2
PDE1C-202ENST00000396182 ZNF618Q5T7W0 954 aa16.32■□□□□ 0.2
PDE1C-202ENST00000396182 GRTP1Q5TC63 336 aa16.32■□□□□ 0.2
PDE1C-202ENST00000396182 SEL1L3Q68CR1 1132 aa16.32■□□□□ 0.2
PDE1C-202ENST00000396182 Q6ZNX1 250 aa16.32■□□□□ 0.2
PDE1C-202ENST00000396182 DEFB132Q7Z7B7 95 aa16.32■□□□□ 0.2
PDE1C-202ENST00000396182 CROCCP3Q8IVE0 287 aa16.32■□□□□ 0.2
PDE1C-202ENST00000396182 HACE1Q8IYU2 909 aa16.32■□□□□ 0.2
PDE1C-202ENST00000396182 DEFB106AQ8N104 65 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms