RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 SLC41A1Q8IVJ1 513 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 SLC35C1Q96A29 364 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 CLIP3Q96DZ5 547 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 C19orf60Q96EN9 201 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 TM6SF2Q9BZW4 377 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 C10orf88Q9H8K7 445 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 MAFO75444 373 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-203ENST00000394872 EPN2O95208 641 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 UQCRBP14927 111 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 CYP2C18P33260 490 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 HSPA14Q0VDF9 509 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 COX10Q12887 443 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 DDHD1Q8NEL9 900 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 SERHL2Q9H4I8 314 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 PRDM16Q9HAZ2 1276 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 SEMA4BQ9NPR2 832 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-203ENST00000394872 SERHLQ9NQF3 203 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 CXCL14O95715 111 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 PTPN4P29074 926 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 C21orf59P57076 290 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 ACSM2AQ08AH3 577 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 ACSM2BQ68CK6 577 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 MOB2Q70IA6 237 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 TTC7BQ86TV6 843 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 MTMR8Q96EF0 704 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 ASB2Q96Q27 587 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 ACO2Q99798 780 aaKnown RBP10.53□□□□□ -0.72
COL4A6-203ENST00000394872 NINJ2Q9NZG7 142 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 TSC22D4Q9Y3Q8 395 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 DDX3XO00571 662 aaKnown RBP eCLIP10.53□□□□□ -0.72
COL4A6-203ENST00000394872 TRIM24O15164 1050 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 CALCAP01258 141 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 ANXA5P08758 320 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 CRYBB1P53674 252 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-203ENST00000394872 ZNHIT3Q15649 155 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-203ENST00000394872 PSMD5Q16401 504 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 PCID2Q5JVF3 399 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 DHFR2Q86XF0 187 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 CAVIN3Q969G5 261 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 IL22Q9GZX6 179 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 HDHD2Q9H0R4 259 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 KLHL3Q9UH77 587 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 SIGLEC16A6NMB1 481 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 FKBP6O75344 327 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 PRKAG1P54619 331 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 FAAP100Q0VG06 881 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 PCBP1Q15365 356 aaKnown RBP eCLIP10.53□□□□□ -0.72
COL4A6-203ENST00000394872 TCHHL1Q5QJ38 904 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-203ENST00000394872 C1orf186Q6ZWK4 172 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 HDDC2Q7Z4H3 204 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 RXFP1Q9HBX9 757 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 KLQ9UEF7 1012 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 HLA-DQA2P01906 255 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 PSMB9P28065 219 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 TKTP29401 623 aaKnown RBP10.53□□□□□ -0.72
COL4A6-203ENST00000394872 RPA3P35244 121 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-203ENST00000394872 ST13P50502 369 aaKnown RBP10.53□□□□□ -0.72
COL4A6-203ENST00000394872 PLPP4Q5VZY2 271 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 DCLRE1AQ6PJP8 1040 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 PLPPR4Q7Z2D5 763 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 FAM20CQ8IXL6 584 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 KATNAL2Q8IYT4 538 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 OR52K1Q8NGK4 314 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 ACTRT2Q8TDY3 377 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 BDH2Q9BUT1 245 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 CD248Q9HCU0 757 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 KLHL1Q9NR64 748 aa10.53□□□□□ -0.72
COL4A6-203ENST00000394872 TNPO3Q9Y5L0 923 aaKnown RBP10.53□□□□□ -0.72
COL4A6-203ENST00000394872 ZCCHC18P0CG32 403 aa10.52□□□□□ -0.72
COL4A6-203ENST00000394872 C4BPBP20851 252 aa10.52□□□□□ -0.72
COL4A6-203ENST00000394872 RPL9P32969 192 aaKnown RBP10.52□□□□□ -0.72
COL4A6-203ENST00000394872 TMED10P49755 219 aaKnown RBP10.52□□□□□ -0.72
COL4A6-203ENST00000394872 BIKQ13323 160 aa10.52□□□□□ -0.72
COL4A6-203ENST00000394872 SDHAF4Q5VUM1 108 aa10.52□□□□□ -0.72
COL4A6-203ENST00000394872 FOXR1Q6PIV2 292 aa10.52□□□□□ -0.72
COL4A6-203ENST00000394872 HJURPQ8NCD3 748 aaPredicted RBP10.52□□□□□ -0.72
COL4A6-203ENST00000394872 NKX2-3Q8TAU0 364 aa10.52□□□□□ -0.72
COL4A6-203ENST00000394872 TRPM4Q8TD43 1214 aa10.52□□□□□ -0.72
COL4A6-203ENST00000394872 UGT2B28Q9BY64 529 aa10.52□□□□□ -0.72
COL4A6-203ENST00000394872 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.52□□□□□ -0.72
COL4A6-203ENST00000394872 ARHGAP23Q9P227 1491 aa10.52□□□□□ -0.72
COL4A6-203ENST00000394872 TPP1O14773 563 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 MRASO14807 208 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 PLSCR1O15162 318 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 PHGDHO43175 533 aaKnown RBP10.52□□□□□ -0.73
COL4A6-203ENST00000394872 BUD23O43709 281 aaKnown RBP10.52□□□□□ -0.73
COL4A6-203ENST00000394872 PSMD10O75832 226 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 ETS1P14921 441 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 STX4Q12846 297 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 CNGA2Q16280 664 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 INAQ16352 499 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 OTUD3Q5T2D3 398 aaPredicted RBP10.52□□□□□ -0.73
COL4A6-203ENST00000394872 STXBP5Q5T5C0 1151 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 DSELQ8IZU8 1212 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 RERGQ96A58 199 aaPredicted RBP10.52□□□□□ -0.73
COL4A6-203ENST00000394872 DEFB118Q96PH6 123 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 DUSP9Q99956 384 aaKnown RBP10.52□□□□□ -0.73
COL4A6-203ENST00000394872 ALG9Q9H6U8 611 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 BLOC1S4Q9NUP1 217 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 CCDC167Q9P0B6 97 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms