RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 HS3ST4Q9Y661 456 aa15.77■□□□□ 0.12
CHMP3-202ENST00000393773 SLC31A1O15431 190 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 MED7O43513 233 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 SMC2O95347 1197 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 GP1BAP07359 652 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 HNRNPA2B1P22626 353 aaKnown RBP15.76■□□□□ 0.11
CHMP3-202ENST00000393773 GNA15P30679 374 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 TMPRSS3P57727 454 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 C5orf22Q49AR2 442 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 TMEM259Q4ZIN3 620 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 ABI3BPQ7Z7G0 1075 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 DEFB106AQ8N104 65 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 OR2A12Q8NGT7 310 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 ZNF606Q8WXB4 792 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 NAF1Q96HR8 494 aaKnown RBP15.76■□□□□ 0.11
CHMP3-202ENST00000393773 DHTKD1Q96HY7 919 aaPredicted RBP15.76■□□□□ 0.11
CHMP3-202ENST00000393773 APOLD1Q96LR9 279 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 CPXM1Q96SM3 734 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 GTPBP4Q9BZE4 634 aaKnown RBP15.76■□□□□ 0.11
CHMP3-202ENST00000393773 CPNE5Q9HCH3 593 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 ASNSD1Q9NWL6 643 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 SLC12A6Q9UHW9 1150 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 ZFR2Q9UPR6 939 aaKnown RBP15.76■□□□□ 0.11
CHMP3-202ENST00000393773 TBC1D30Q9Y2I9 924 aa15.76■□□□□ 0.11
CHMP3-202ENST00000393773 SCN8AQ9UQD0 1980 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 KPNA3O00505 521 aaPredicted RBP15.75■□□□□ 0.11
CHMP3-202ENST00000393773 THAP12O43422 761 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 BNIP3LO60238 219 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 SNAP91O60641 907 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 HSF2BPO75031 334 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 CSO75390 466 aaKnown RBP15.75■□□□□ 0.11
CHMP3-202ENST00000393773 CLDN11O75508 207 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 MT-CO1P00395 513 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 GLI1P08151 1106 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 MYF5P13349 255 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 ZNF18P17022 549 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 UCNP55089 124 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 MARSP56192 900 aaKnown RBP15.75■□□□□ 0.11
CHMP3-202ENST00000393773 CLDN2P57739 230 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 CDK17Q00537 523 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 STIM1Q13586 685 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 HS1BP3Q53T59 392 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 SEL1L3Q68CR1 1132 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 NEK5Q6P3R8 708 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 FOXR2Q6PJQ5 311 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 OLFML1Q6UWY5 402 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 C14orf80Q86SX3 495 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 FAM181AQ8N9Y4 354 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 PPP1R9BQ96SB3 815 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 VPS51Q9UID3 782 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 BSNQ9UPA5 3926 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 LRRK1Q38SD2 2015 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 HECTD1Q9ULT8 2610 aa15.75■□□□□ 0.11
CHMP3-202ENST00000393773 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.74■□□□□ 0.11
CHMP3-202ENST00000393773 BECN2A8MW95 431 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 I6L893 689 aaPredicted RBP15.74■□□□□ 0.11
CHMP3-202ENST00000393773 K7ERQ8 282 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 USP12O75317 370 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 PAGE1O75459 146 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 DAB1O75553 588 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 CNTN5O94779 1100 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 BMP6P22004 513 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 AKT2P31751 481 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 CHRNA3P32297 505 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 LSSP48449 732 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 ERVPABLB-1P60509 514 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 RHDQ02161 417 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 ZNF177Q13360 481 aaPredicted RBP15.74■□□□□ 0.11
CHMP3-202ENST00000393773 C22orf39Q6P5X5 142 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 FAM183BPQ6ZVS7 135 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 ZNF683Q8IZ20 524 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 WDTC1Q8N5D0 677 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 CHST14Q8NCH0 376 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 ZNF548Q8NEK5 533 aaPredicted RBP15.74■□□□□ 0.11
CHMP3-202ENST00000393773 TMIEQ8NEW7 156 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 IFT43Q96FT9 208 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 WBP1Q96G27 269 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 SEMA4CQ9C0C4 833 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 MUC3BQ9H195 1237 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 POLR1BQ9H9Y6 1135 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 MAN1B1Q9UKM7 699 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 SSUH2Q9Y2M2 353 aa15.74■□□□□ 0.11
CHMP3-202ENST00000393773 NAV2Q8IVL1 2488 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 UBR5O95071 2799 aaPredicted RBP15.73■□□□□ 0.11
CHMP3-202ENST00000393773 A0A1W2PNU3 283 aaPredicted RBP15.73■□□□□ 0.11
CHMP3-202ENST00000393773 A6NNZ2 444 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 K7ESM1 405 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 SCAMP1O15126 338 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 SMAD6O43541 496 aaKnown RBP15.73■□□□□ 0.11
CHMP3-202ENST00000393773 GRAP2O75791 330 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 NEBLO76041 1014 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 AFPP02771 609 aaKnown RBP15.73■□□□□ 0.11
CHMP3-202ENST00000393773 ALPPL2P10696 532 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 RRM1P23921 792 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 CDH4P55283 916 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 ALFQ53S48 1182 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 ARTNQ5T4W7 220 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 BROXQ5VW32 411 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 ISM2Q6H9L7 571 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 OR6B2Q6IFH4 312 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms