RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 PFDN6O15212 129 aa15.93■□□□□ 0.14
CSNK1A1-202ENST00000377843 JRKO75564 520 aa15.93■□□□□ 0.14
CSNK1A1-202ENST00000377843 YBX3P16989 372 aaKnown RBP eCLIP15.93■□□□□ 0.141e-8■□□□□ 9.5
CSNK1A1-202ENST00000377843 TRPC3Q13507 836 aa15.93■□□□□ 0.14
CSNK1A1-202ENST00000377843 HERC3Q15034 1050 aa15.93■□□□□ 0.14
CSNK1A1-202ENST00000377843 CSF3RQ99062 836 aa15.93■□□□□ 0.14
CSNK1A1-202ENST00000377843 MROQ9BYG7 248 aa15.93■□□□□ 0.14
CSNK1A1-202ENST00000377843 NDEL1Q9GZM8 345 aa15.93■□□□□ 0.14
CSNK1A1-202ENST00000377843 PCDHGC3Q9UN70 934 aa15.93■□□□□ 0.14
CSNK1A1-202ENST00000377843 FAM149AA5PLN7 773 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 TRIM24O15164 1050 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 GCATO75600 419 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 ERVK-10P10266 1014 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 NR4A1P22736 598 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 TKTP29401 623 aaKnown RBP15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 HOXD11P31277 338 aaPredicted RBP15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 GNL1P36915 607 aaPredicted RBP15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 OPRL1P41146 370 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 ORC1Q13415 861 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 SEL1L3Q68CR1 1132 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 VASH1Q7L8A9 365 aaPredicted RBP15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 TNIP2Q8NFZ5 429 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 ACER1Q8TDN7 264 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 CTRCQ99895 268 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 CAB39LQ9H9S4 337 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 TCAF1Q9Y4C2 921 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 BCLAF3A2AJT9 711 aaKnown RBP15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 CCNA2P20248 432 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 MYL6P60660 151 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 IFITM3Q01628 133 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 C15orf59Q2T9L4 293 aaPredicted RBP15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 EML3Q32P44 896 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 DCLK2Q8N568 766 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 HMGCLL1Q8TB92 370 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 CANT1Q8WVQ1 401 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 ZNF641Q96N77 438 aaPredicted RBP15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 CGRRF1Q99675 332 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 OLFM1Q99784 485 aa15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 MTG1Q9BT17 334 aaPredicted RBP15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 ILKAPQ9H0C8 392 aaPredicted RBP15.92■□□□□ 0.14
CSNK1A1-202ENST00000377843 A6NL46 340 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 TMEM114B3SHH9 223 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 ASS1P00966 412 aaKnown RBP15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 EDN1P05305 212 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 TFEBP19484 476 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 MAP4P27816 1152 aaKnown RBP15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 PTPN9P43378 593 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 PGGT1BP53609 377 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 NME5P56597 212 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 MERTKQ12866 999 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 ARL13AQ5H913 290 aaPredicted RBP15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 CYS1Q717R9 158 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 SAPCD2Q86UD0 394 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 ZNF354CQ86Y25 554 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 CNTD1Q8N815 330 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 Q8N9G6 341 aaPredicted RBP15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 MFSD2AQ8NA29 543 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 SLC4A11Q8NBS3 891 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 PCDH19Q8TAB3 1148 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 ARNTL2Q8WYA1 636 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 CEP170P1Q96L14 293 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 CCDC138Q96M89 665 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 PSD2Q9BQI7 771 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 COA1Q9GZY4 146 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 KLHL25Q9H0H3 589 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 SOX17Q9H6I2 414 aaPredicted RBP15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 VTA1Q9NP79 307 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 ANKEF1Q9NU02 776 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 MRPL11Q9Y3B7 192 aaKnown RBP15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 TIMM22Q9Y584 194 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 SPO11Q9Y5K1 396 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 SLX4Q8IY92 1834 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 TMEM233B4DJY2 109 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 KPNA4O00629 521 aaPredicted RBP15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 PAPSS1O43252 624 aaPredicted RBP15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 TRIM13O60858 407 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 CAPN15O75808 1086 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 CLPXO76031 633 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 PIGNO95427 931 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 BMP2P12643 396 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 TFE3P19532 575 aaPredicted RBP15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 CA8P35219 290 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 RPL14P50914 215 aaKnown RBP15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 SELENBP1Q13228 472 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 TFDP2Q14188 446 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 SLC36A3Q495N2 470 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 SNX31Q8N9S9 440 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 ACVR1CQ8NER5 493 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 ANKRD36BP1Q96IX9 119 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 UNKQ9C0B0 810 aaKnown RBP15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 FBXO28Q9NVF7 368 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 SCHIP1Q9P0W5 487 aaPredicted RBP15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 TRAF6Q9Y4K3 522 aa15.91■□□□□ 0.14
CSNK1A1-202ENST00000377843 HPCAL1P37235 193 aa15.9■□□□□ 0.14
CSNK1A1-202ENST00000377843 PSMD8P48556 350 aa15.9■□□□□ 0.14
CSNK1A1-202ENST00000377843 GTF2A2P52657 109 aa15.9■□□□□ 0.14
CSNK1A1-202ENST00000377843 BCAR1P56945 870 aa15.9■□□□□ 0.14
CSNK1A1-202ENST00000377843 SESN2P58004 480 aaPredicted RBP15.9■□□□□ 0.14
CSNK1A1-202ENST00000377843 DMPKQ09013 629 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms