RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 IFT43Q96FT9 208 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 GFM1Q96RP9 751 aaKnown RBP12.63□□□□□ -0.39
HDAC8-204ENST00000373560 STRIP2Q9ULQ0 834 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 PCDHB11Q9Y5F2 797 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 A0A087X0B3 334 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 A0A1B0GTL3 188 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 VPS4BO75351 444 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 HNRNPA2B1P22626 353 aaKnown RBP12.62□□□□□ -0.39
HDAC8-204ENST00000373560 YWHAGP61981 247 aaKnown RBP eCLIP12.62□□□□□ -0.39
HDAC8-204ENST00000373560 CYP24A1Q07973 514 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 EIF2B5Q13144 721 aaKnown RBP12.62□□□□□ -0.39
HDAC8-204ENST00000373560 TRPC3Q13507 836 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 PSMD6Q15008 389 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 TCEA2Q15560 299 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 SPOPLQ6IQ16 392 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 FAM114A1Q8IWE2 563 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 GALNT11Q8NCW6 608 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 FRS2Q8WU20 508 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 CALML4Q96GE6 196 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 CPEB1Q9BZB8 566 aaKnown RBP12.62□□□□□ -0.39
HDAC8-204ENST00000373560 STRADBQ9C0K7 418 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 VRTNQ9H8Y1 702 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 PNPLA8Q9NP80 782 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 CUEDC1Q9NWM3 386 aaPredicted RBP12.62□□□□□ -0.39
HDAC8-204ENST00000373560 DONSONQ9NYP3 566 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 PADI4Q9UM07 663 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 VPS4AQ9UN37 437 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 CSNK1G3Q9Y6M4 447 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 CROCCQ5TZA2 2017 aa12.62□□□□□ -0.39
HDAC8-204ENST00000373560 PCNX1Q96RV3 2341 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 LRP4O75096 1905 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 SPTY2D1-AS1A0A0U1RR47 76 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 A6NNZ2 444 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.61□□□□□ -0.39
HDAC8-204ENST00000373560 DIAPH2O60879 1101 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 CLSTN1O94985 981 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 CD2BP2O95400 341 aaKnown RBP12.61□□□□□ -0.39
HDAC8-204ENST00000373560 SRPRAP08240 638 aaKnown RBP12.61□□□□□ -0.39
HDAC8-204ENST00000373560 JUNDP17535 347 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 GJB2P29033 226 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 OAS2P29728 719 aaKnown RBP12.61□□□□□ -0.39
HDAC8-204ENST00000373560 AKT2P31751 481 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 ADKP55263 362 aaKnown RBP12.61□□□□□ -0.39
HDAC8-204ENST00000373560 MRPL49Q13405 166 aaKnown RBP12.61□□□□□ -0.39
HDAC8-204ENST00000373560 C16orf72Q14CZ0 275 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 ANKRD1Q15327 319 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 SURF1Q15526 300 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 SNRNP35Q16560 246 aaKnown RBP12.61□□□□□ -0.39
HDAC8-204ENST00000373560 ZNF667Q5HYK9 610 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 SV2AQ7L0J3 742 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 PARGQ86W56 976 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 CARNMT1Q8N4J0 409 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 KDM1BQ8NB78 822 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 WDR48Q8TAF3 677 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 FIBINQ8TAL6 211 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 EDEM1Q92611 657 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 NAT6Q93015 286 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 SYAP1Q96A49 352 aaPredicted RBP12.61□□□□□ -0.39
HDAC8-204ENST00000373560 CDK5RAP1Q96SZ6 601 aaKnown RBP12.61□□□□□ -0.39
HDAC8-204ENST00000373560 IL12RB2Q99665 862 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 LRRC61Q9BV99 259 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 CLPBQ9H078 707 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 NCKIPSDQ9NZQ3 722 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 TRPM6Q9BX84 2022 aa12.61□□□□□ -0.39
HDAC8-204ENST00000373560 UNC13CQ8NB66 2214 aa12.6□□□□□ -0.39
HDAC8-204ENST00000373560 PDGFAP04085 211 aa12.6□□□□□ -0.39
HDAC8-204ENST00000373560 CTSLP07711 333 aa12.6□□□□□ -0.39
HDAC8-204ENST00000373560 CCL4P13236 92 aa12.6□□□□□ -0.39
HDAC8-204ENST00000373560 ATICP31939 592 aa12.6□□□□□ -0.39
HDAC8-204ENST00000373560 ECT2LQ008S8 904 aa12.6□□□□□ -0.39
HDAC8-204ENST00000373560 EIF2S3LQ2VIR3 472 aaKnown RBP12.6□□□□□ -0.39
HDAC8-204ENST00000373560 MSS51Q4VC12 460 aa12.6□□□□□ -0.39
HDAC8-204ENST00000373560 KYAT3Q6YP21 454 aaKnown RBP12.6□□□□□ -0.39
HDAC8-204ENST00000373560 RETREG3Q86VR2 466 aa12.6□□□□□ -0.39
HDAC8-204ENST00000373560 HEATR4Q86WZ0 1026 aa12.6□□□□□ -0.39
HDAC8-204ENST00000373560 HORMAD1Q86X24 394 aa12.6□□□□□ -0.39
HDAC8-204ENST00000373560 CFAP52Q8N1V2 620 aa12.6□□□□□ -0.39
HDAC8-204ENST00000373560 CYFIP2Q96F07 1278 aa12.6□□□□□ -0.39
HDAC8-204ENST00000373560 SPAG5Q96R06 1193 aa12.6□□□□□ -0.39
HDAC8-204ENST00000373560 OLFML3Q9NRN5 406 aa12.6□□□□□ -0.39
HDAC8-204ENST00000373560 SIRPGQ9P1W8 387 aa12.6□□□□□ -0.39
HDAC8-204ENST00000373560 ERRFI1Q9UJM3 462 aaPredicted RBP12.6□□□□□ -0.39
HDAC8-204ENST00000373560 MTORP42345 2549 aa12.6□□□□□ -0.39
HDAC8-204ENST00000373560 H3BM21 787 aa12.59□□□□□ -0.39
HDAC8-204ENST00000373560 TULP2O00295 520 aa12.59□□□□□ -0.39
HDAC8-204ENST00000373560 TPP1O14773 563 aa12.59□□□□□ -0.39
HDAC8-204ENST00000373560 LDLRP01130 860 aa12.59□□□□□ -0.39
HDAC8-204ENST00000373560 UBA7P41226 1012 aa12.59□□□□□ -0.39
HDAC8-204ENST00000373560 ASPAP45381 313 aa12.59□□□□□ -0.39
HDAC8-204ENST00000373560 ZFP36L1Q07352 338 aaKnown RBP12.59□□□□□ -0.39
HDAC8-204ENST00000373560 CDC20Q12834 499 aa12.59□□□□□ -0.39
HDAC8-204ENST00000373560 PDE1CQ14123 709 aaPredicted RBP12.59□□□□□ -0.39
HDAC8-204ENST00000373560 DEFB109BQ30KR1 87 aa12.59□□□□□ -0.39
HDAC8-204ENST00000373560 TMEM259Q4ZIN3 620 aa12.59□□□□□ -0.39
HDAC8-204ENST00000373560 PRR30Q53SZ7 412 aaPredicted RBP12.59□□□□□ -0.39
HDAC8-204ENST00000373560 PPP1R26Q5T8A7 1209 aaPredicted RBP12.59□□□□□ -0.39
HDAC8-204ENST00000373560 UNKQ9C0B0 810 aaKnown RBP12.59□□□□□ -0.39
HDAC8-204ENST00000373560 GULP1Q9UBP9 304 aa12.59□□□□□ -0.39
HDAC8-204ENST00000373560 APOBEC3BQ9UH17 382 aaKnown RBP12.59□□□□□ -0.39
HDAC8-204ENST00000373560 PPM1HQ9ULR3 514 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms