RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 TFE3P19532 575 aaPredicted RBP10.26□□□□□ -0.77
TPM3-210ENST00000368530 NTSR1P30989 418 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 SDC4P31431 198 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 ACADSBP45954 432 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 DYNLT1P63172 113 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 ADCY2Q08462 1091 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 BYSLQ13895 437 aaKnown RBP10.26□□□□□ -0.77
TPM3-210ENST00000368530 DHX34Q14147 1143 aaKnown RBP10.26□□□□□ -0.77
TPM3-210ENST00000368530 CYP1B1Q16678 543 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 DUOXA1Q1HG43 343 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 FAM153CQ494X1 144 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 KIAA1211LQ6NV74 962 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 CLEC20AQ6ZU45 233 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 SIX6OS1Q8N1H7 587 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 FAM172AQ8WUF8 416 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 HAUS1Q96CS2 278 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 HSFY1Q96LI6 401 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 CCDC114Q96M63 670 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 KLF16Q9BXK1 252 aaPredicted RBP10.26□□□□□ -0.77
TPM3-210ENST00000368530 DCLK3Q9C098 648 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 LRRC4Q9HBW1 653 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 CD93Q9NPY3 652 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.26□□□□□ -0.77
TPM3-210ENST00000368530 GPATCH2LQ9NWQ4 482 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 COMMD8Q9NX08 183 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 OSER1Q9NX31 292 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 GMIPQ9P107 970 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 CALCOCO1Q9P1Z2 691 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 BCCIPQ9P287 314 aaKnown RBP eCLIP10.26□□□□□ -0.77
TPM3-210ENST00000368530 FAM153AQ9UHL3 310 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 RASAL2Q9UJF2 1139 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 MSRB2Q9Y3D2 182 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 PCDH15Q96QU1 1955 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 BAHCC1Q9P281 2608 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 FREM2Q5SZK8 3169 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 hCG_1818297A0A087WSY0 165 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 MAP2K7O14733 419 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 ATP8B1O43520 1251 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 PRPSAP2O60256 369 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 ECEL1O95672 775 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 CD48P09326 243 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 CISD3P0C7P0 127 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 DPP6P42658 865 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 WASP42768 502 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 CDKN2BP42772 138 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 SIM1P81133 766 aaPredicted RBP10.25□□□□□ -0.77
TPM3-210ENST00000368530 ZNF33AQ06730 810 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 ACAP1Q15027 740 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 EGFLAMQ63HQ2 1017 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 SLC26A9Q7LBE3 791 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 GPRIN1Q7Z2K8 1008 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 POLNQ7Z5Q5 900 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 ZDHHC17Q8IUH5 632 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 PGBD3Q8N328 593 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 KCTD6Q8NC69 237 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 OR2I1PQ8NGU4 316 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 FAM149B1Q96BN6 582 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 ZNF419Q96HQ0 510 aaPredicted RBP10.25□□□□□ -0.77
TPM3-210ENST00000368530 GABRG3Q99928 467 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 RAB17Q9H0T7 212 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 NEUROG2Q9H2A3 272 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 SLC32A1Q9H598 525 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 LRRC19Q9H756 370 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 DMAP1Q9NPF5 467 aaPredicted RBP10.25□□□□□ -0.77
TPM3-210ENST00000368530 CYLDQ9NQC7 956 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 MARK1Q9P0L2 795 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 PCYOX1Q9UHG3 505 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 FBXO10Q9UK96 956 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 SNX24Q9Y343 169 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 SH3BP1Q9Y3L3 701 aa10.25□□□□□ -0.77
TPM3-210ENST00000368530 MYO18AQ92614 2054 aaKnown RBP10.24□□□□□ -0.77
TPM3-210ENST00000368530 SYNJ2BP-COX16A0A087WUM0 186 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 C3orf70A6NLC5 250 aaPredicted RBP10.24□□□□□ -0.77
TPM3-210ENST00000368530 HHLA1C9JL84 531 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 ARHGAP33O14559 1287 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 CACNG3O60359 315 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 TLR5O60602 858 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 TJP3O95049 919 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 HOXB2P14652 356 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 DESP17661 470 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 NDUFV2P19404 249 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 KDELR1P24390 212 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 PCK1P35558 622 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 RPL34P49207 117 aaKnown RBP10.24□□□□□ -0.77
TPM3-210ENST00000368530 FNTAP49354 379 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 TKTL1P51854 596 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 COPS2P61201 443 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 RPL6Q02878 288 aaKnown RBP10.24□□□□□ -0.77
TPM3-210ENST00000368530 KLF1Q13351 362 aaPredicted RBP10.24□□□□□ -0.77
TPM3-210ENST00000368530 CUL1Q13616 776 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 PPP1R7Q15435 360 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 TRIP13Q15645 432 aaPredicted RBP10.24□□□□□ -0.77
TPM3-210ENST00000368530 ANO4Q32M45 955 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 TFDP3Q5H9I0 405 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 BTBD8Q5XKL5 378 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 EMBQ6PCB8 327 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 SLC36A4Q6YBV0 504 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 TRMT11Q7Z4G4 463 aaKnown RBP10.24□□□□□ -0.77
TPM3-210ENST00000368530 RFX6Q8HWS3 928 aa10.24□□□□□ -0.77
TPM3-210ENST00000368530 DEFB106AQ8N104 65 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms