RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 CXorf56Q9H5V9 222 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 ALKBH4Q9NXW9 302 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 CDH22Q9UJ99 828 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 SLC13A4Q9UKG4 626 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 SUFUQ9UMX1 484 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 DHDHQ9UQ10 334 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 MST1RQ04912 1400 aa4.63□□□□□ -1.67
RNU6-560P-201ENST00000364007 OVOL3O00110 214 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 PER2O15055 1255 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 TLX3O43711 291 aaPredicted RBP4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 LCKP06239 509 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 IFIT1P09914 478 aaKnown RBP4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 ATP1A3P13637 1013 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 PSMC2P35998 433 aaKnown RBP4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 GGT5P36269 586 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 NR1H2P55055 460 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 VAMP2P63027 116 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 GAD2Q05329 585 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 PKP1Q13835 747 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 ALG10Q5BKT4 473 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 ALG10BQ5I7T1 473 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 C6orf10Q5SRN2 563 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 INTS11Q5TA45 600 aaKnown RBP4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 JAKMIP3Q5VZ66 844 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 TMEM268Q5VZI3 342 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 CCDC70Q6NSX1 233 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 SLC22A25Q6T423 547 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 LRRC8DQ7L1W4 858 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 ADGRG6Q86SQ4 1221 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 TRIM74Q86UV6 250 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 TRIM73Q86UV7 250 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 PAF1Q8N7H5 531 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 NANOGP1Q8N7R0 232 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 SLC44A5Q8NCS7 719 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 ZNF548Q8NEK5 533 aaPredicted RBP4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 FAR1Q8WVX9 515 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 ST8SIA4Q92187 359 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 RPL36ALQ969Q0 106 aaKnown RBP4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 CLMNQ96JQ2 1002 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 ZFYVE19Q96K21 471 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 CD180Q99467 661 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 PAIP1Q9H074 479 aaKnown RBP4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 UBN1Q9NPG3 1134 aa4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 CNOT7Q9UIV1 285 aaKnown RBP4.62□□□□□ -1.67
RNU6-560P-201ENST00000364007 TMEM247A6NEH6 219 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 DDTLA6NHG4 134 aaPredicted RBP4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 ATG13O75143 517 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 TULP3O75386 442 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 FGBP02675 491 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 SLC16A2P36021 539 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 SKIV2L2P42285 1042 aaKnown RBP4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 POU5F1BQ06416 359 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 SYTL3Q4VX76 610 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 KDELC2Q7Z4H8 507 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 IGFN1Q86VF2 1251 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 MON1AQ86VX9 555 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 GHDCQ8N2G8 530 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 SLC25A41Q8N5S1 370 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 RFWD2Q8NHY2 731 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 TMEM174Q8WUU8 243 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 RAB40AQ8WXH6 277 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 HSPH1Q92598 858 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 CNOT9Q92600 299 aaKnown RBP4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 SH3KBP1Q96B97 665 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 APOPT1Q96IL0 206 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 FRG2BQ96QU4 278 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 SEC62Q99442 399 aaKnown RBP4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 EYA3Q99504 573 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 LBHD1Q9BQE6 289 aaPredicted RBP4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 WDR83Q9BRX9 315 aaKnown RBP4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 FUZQ9BT04 418 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 IFT27Q9BW83 186 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 AGXT2Q9BYV1 514 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 SLC29A3Q9BZD2 475 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 ACTR5Q9H9F9 607 aaPredicted RBP4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 ZDHHC7Q9NXF8 308 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 TUBA8Q9NY65 449 aaPredicted RBP4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 TBX20Q9UMR3 447 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 ARHGAP26Q9UNA1 814 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 OSGIN2Q9Y236 505 aa4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 ZNF335Q9H4Z2 1342 aaPredicted RBP4.61□□□□□ -1.67
RNU6-560P-201ENST00000364007 TMCC1O94876 653 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 NDUFB8O95169 186 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 ADAP00813 363 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 URODP06132 367 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 CHRM4P08173 479 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 CDH15P55291 814 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 TMPRSS3P57727 454 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 RPP30P78346 268 aaKnown RBP4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 INPP5JQ15735 1006 aaPredicted RBP4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 GPR68Q15743 365 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 RPE65Q16518 533 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 SLC4A8Q2Y0W8 1093 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 NUGGCQ68CJ6 796 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 WDR5BQ86VZ2 330 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 LRRC57Q8N9N7 239 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 DNAAF1Q8NEP3 725 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 DENND1AQ8TEH3 1009 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 HDAC7Q8WUI4 952 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 ZUFSPQ96AP4 578 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms