RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 EIF3CQ99613 913 aaKnown RBP20.5■□□□□ 0.87
CEACAM3-201ENST00000344550 ACE2Q9BYF1 805 aaPredicted RBP20.5■□□□□ 0.87
CEACAM3-201ENST00000344550 MAGEH1Q9H213 219 aa20.5■□□□□ 0.87
CEACAM3-201ENST00000344550 GAREM1Q9H706 876 aa20.5■□□□□ 0.87
CEACAM3-201ENST00000344550 TMPRSS4Q9NRS4 437 aa20.5■□□□□ 0.87
CEACAM3-201ENST00000344550 PARVAQ9NVD7 372 aa20.5■□□□□ 0.87
CEACAM3-201ENST00000344550 TMEM248Q9NWD8 314 aa20.5■□□□□ 0.87
CEACAM3-201ENST00000344550 DMTF1Q9Y222 760 aa20.5■□□□□ 0.87
CEACAM3-201ENST00000344550 ANKRD6Q9Y2G4 727 aa20.5■□□□□ 0.87
CEACAM3-201ENST00000344550 SNX10Q9Y5X0 201 aa20.5■□□□□ 0.87
CEACAM3-201ENST00000344550 GIPC1O14908 333 aa20.49■□□□□ 0.87
CEACAM3-201ENST00000344550 PLRG1O43660 514 aaKnown RBP20.49■□□□□ 0.87
CEACAM3-201ENST00000344550 ZMPSTE24O75844 475 aa20.49■□□□□ 0.87
CEACAM3-201ENST00000344550 MT-CO1P00395 513 aa20.49■□□□□ 0.87
CEACAM3-201ENST00000344550 VAV1P15498 845 aa20.49■□□□□ 0.87
CEACAM3-201ENST00000344550 RECQLP46063 649 aaPredicted RBP20.49■□□□□ 0.87
CEACAM3-201ENST00000344550 CSNK1EP49674 416 aaKnown RBP20.49■□□□□ 0.87
CEACAM3-201ENST00000344550 SERPINH1P50454 418 aaKnown RBP20.49■□□□□ 0.87
CEACAM3-201ENST00000344550 GLRX5Q86SX6 157 aa20.49■□□□□ 0.87
CEACAM3-201ENST00000344550 NLRP14Q86W24 1093 aa20.49■□□□□ 0.87
CEACAM3-201ENST00000344550 PCDH20Q8N6Y1 951 aaKnown RBP20.49■□□□□ 0.87
CEACAM3-201ENST00000344550 OR2A12Q8NGT7 310 aa20.49■□□□□ 0.87
CEACAM3-201ENST00000344550 PIP4K2CQ8TBX8 421 aa20.49■□□□□ 0.87
CEACAM3-201ENST00000344550 TBC1D31Q96DN5 1066 aa20.49■□□□□ 0.87
CEACAM3-201ENST00000344550 PREBQ9HCU5 417 aa20.49■□□□□ 0.87
CEACAM3-201ENST00000344550 ATP13A1Q9HD20 1204 aa20.49■□□□□ 0.87
CEACAM3-201ENST00000344550 KNL1Q8NG31 2342 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 A0A1B0GVT2 93 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 ZSCAN5CA6NGD5 496 aaPredicted RBP20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 FAM47DPA6NHR8 397 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 SNAP91O60641 907 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 LRIG2O94898 1065 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 SERPINC1P01008 464 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 CHRNA3P32297 505 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 BNC1Q01954 994 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 OVGP1Q12889 678 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 ASIC2Q16515 512 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 ZNF423Q2M1K9 1284 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 SLC45A4Q5BKX6 768 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 EFHC2Q5JST6 749 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 SFMBT2Q5VUG0 894 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 DCUN1D2Q6PH85 259 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 PRPF39Q86UA1 669 aaKnown RBP20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 TRIM69Q86WT6 500 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 NCAPGQ9BPX3 1015 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 SPON2Q9BUD6 331 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 TTYH3Q9C0H2 523 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 TM7SF3Q9NS93 570 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 SARDHQ9UL12 918 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 HPCAL4Q9UM19 191 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 BZW2Q9Y6E2 419 aaKnown RBP20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 ADAMTS9Q9P2N4 1935 aa20.48■□□□□ 0.87
CEACAM3-201ENST00000344550 TBC1D3DA0A087WVF3 549 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 TBC1D3IA0A087WXS9 549 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 TBC1D3EA0A087X179 549 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 TBC1D3KA0A087X1G2 549 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 TBC1D3FA6NER0 549 aaPredicted RBP20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 LRRC53A6NM62 1247 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 TBC1D3LB9A6J9 549 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 CBX4O00257 560 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 FLRT2O43155 660 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 PCDHGA12O60330 932 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 RNGTTO60942 597 aaKnown RBP20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 TBC1D3HP0C7X1 549 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 CTSKP43235 329 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 KIF19Q2TAC6 998 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 TBC1D3GQ6DHY5 549 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 TBC1D3CQ6IPX1 549 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 PLEKHA7Q6IQ23 1121 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 RWDD4Q6NW29 188 aaKnown RBP20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 C22orf39Q6P5X5 142 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 ADAT2Q7Z6V5 191 aaKnown RBP20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 PHLDB2Q86SQ0 1253 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 IQCHQ86VS3 1027 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 ZSCAN30Q86W11 494 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 NAXDQ8IW45 347 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 TBC1D3Q8IZP1 549 aaPredicted RBP20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 OR7D4Q8NG98 312 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 FNIP1Q8TF40 1166 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 CASKIN2Q8WXE0 1202 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 SYN2Q92777 582 aaPredicted RBP20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 TRIM11Q96F44 468 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 PPP1R16AQ96I34 528 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 LRIG1Q96JA1 1093 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 MCEEQ96PE7 176 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 HDAC8Q9BY41 377 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 PCDHB9Q9Y5E1 797 aa20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 NYNRINQ9P2P1 1898 aaKnown RBP20.47■□□□□ 0.87
CEACAM3-201ENST00000344550 A0A1W2PQJ5 194 aa20.46■□□□□ 0.87
CEACAM3-201ENST00000344550 YKT6O15498 198 aa20.46■□□□□ 0.87
CEACAM3-201ENST00000344550 MAGEC1O60732 1142 aa20.46■□□□□ 0.87
CEACAM3-201ENST00000344550 RAMP2O60895 175 aa20.46■□□□□ 0.87
CEACAM3-201ENST00000344550 RRM1P23921 792 aa20.46■□□□□ 0.87
CEACAM3-201ENST00000344550 CD38P28907 300 aa20.46■□□□□ 0.87
CEACAM3-201ENST00000344550 C21orf59P57076 290 aa20.46■□□□□ 0.87
CEACAM3-201ENST00000344550 YBEYP58557 167 aaPredicted RBP20.46■□□□□ 0.87
CEACAM3-201ENST00000344550 SIM1P81133 766 aaPredicted RBP20.46■□□□□ 0.87
CEACAM3-201ENST00000344550 CNTN1Q12860 1018 aa20.46■□□□□ 0.87
CEACAM3-201ENST00000344550 SKOR2Q2VWA4 1001 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms