RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 ATG14Q6ZNE5 492 aa17.33■□□□□ 0.36
TRA2B-202ENST00000342294 SH2D3CQ8N5H7 860 aa17.33■□□□□ 0.36
TRA2B-202ENST00000342294 FEM1AQ9BSK4 669 aa17.33■□□□□ 0.36
TRA2B-202ENST00000342294 SALL4Q9UJQ4 1053 aa17.33■□□□□ 0.36
TRA2B-202ENST00000342294 HS3ST3A1Q9Y663 406 aa17.33■□□□□ 0.36
TRA2B-202ENST00000342294 COL12A1Q99715 3063 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 SPTY2D1-AS1A0A0U1RR47 76 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 A6NNZ2 444 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 KCNU1A8MYU2 1149 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 RNF103O00237 685 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 ITGA2BP08514 1039 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 PRR29P0C7W0 189 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 TBXAS1P24557 533 aaPredicted RBP17.32■□□□□ 0.36
TRA2B-202ENST00000342294 PDX1P52945 283 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 NFKB2Q00653 900 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 STILQ15468 1287 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 FOXD4L6Q3SYB3 417 aaPredicted RBP17.32■□□□□ 0.36
TRA2B-202ENST00000342294 PERM1Q5SV97 790 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 TTC39BQ5VTQ0 682 aaPredicted RBP17.32■□□□□ 0.36
TRA2B-202ENST00000342294 SEL1L3Q68CR1 1132 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 OR6B2Q6IFH4 312 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 TMEM270Q6UE05 265 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 FOXD4L3Q6VB84 417 aaPredicted RBP17.32■□□□□ 0.36
TRA2B-202ENST00000342294 TMIEQ8NEW7 156 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 FAM149B1Q96BN6 582 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 KLF15Q9UIH9 416 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 SLC25A13Q9UJS0 675 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 RCOR1Q9UKL0 485 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 TLN1Q9Y490 2541 aaKnown RBP17.32■□□□□ 0.36
TRA2B-202ENST00000342294 AHCTF1Q8WYP5 2266 aa17.32■□□□□ 0.36
TRA2B-202ENST00000342294 CCDC187A0A096LP49 1063 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 POM121BA6NF01 834 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 TPP1O14773 563 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 CASC3O15234 703 aaKnown RBP17.31■□□□□ 0.36
TRA2B-202ENST00000342294 SART1O43290 800 aaKnown RBP17.31■□□□□ 0.36
TRA2B-202ENST00000342294 NOBOXO60393 691 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 TRUB2O95900 331 aaKnown RBP17.31■□□□□ 0.36
TRA2B-202ENST00000342294 CALCAP01258 141 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 ITGB2P05107 769 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 EPB41P11171 864 aaKnown RBP17.31■□□□□ 0.36
TRA2B-202ENST00000342294 PFKFB1P16118 471 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 BRD2P25440 801 aaKnown RBP17.31■□□□□ 0.36
TRA2B-202ENST00000342294 CHRNA3P32297 505 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 PITX1P78337 314 aaPredicted RBP17.31■□□□□ 0.36
TRA2B-202ENST00000342294 CCDC15Q0P6D6 951 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 DPYDQ12882 1025 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 FGL2Q14314 439 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 C6orf132Q5T0Z8 1188 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 FOXD4L5Q5VV16 416 aaPredicted RBP17.31■□□□□ 0.36
TRA2B-202ENST00000342294 FOXR1Q6PIV2 292 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 CRTC1Q6UUV9 634 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 KYAT3Q6YP21 454 aaKnown RBP17.31■□□□□ 0.36
TRA2B-202ENST00000342294 ATP6V0D2Q8N8Y2 350 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 OR2A12Q8NGT7 310 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 FOXD4L4Q8WXT5 416 aaPredicted RBP17.31■□□□□ 0.36
TRA2B-202ENST00000342294 PPP1R9BQ96SB3 815 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 SEMA3CQ99985 751 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRA2B-202ENST00000342294 HPSEQ9Y251 543 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 HS3ST2Q9Y278 367 aa17.31■□□□□ 0.36
TRA2B-202ENST00000342294 BOD1L1Q8NFC6 3051 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 DOPEY2Q9Y3R5 2298 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 A0A1B0GVL5 298 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 KPNA3O00505 521 aaPredicted RBP17.3■□□□□ 0.36
TRA2B-202ENST00000342294 AQP9O43315 295 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 BNIP3LO60238 219 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 MT-CO1P00395 513 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 NTRK1P04629 796 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 SRCP12931 536 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 GPD2P43304 727 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 C1QBPQ07021 282 aaKnown RBP17.3■□□□□ 0.36
TRA2B-202ENST00000342294 LRMPQ12912 555 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 DRAP1Q14919 205 aaPredicted RBP17.3■□□□□ 0.36
TRA2B-202ENST00000342294 NR0B2Q15466 257 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 RABGAP1LQ5R372 815 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 ATL3Q6DD88 541 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 FBXL22Q6P050 247 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 ZNF574Q6ZN55 896 aaPredicted RBP17.3■□□□□ 0.36
TRA2B-202ENST00000342294 PTAR1Q7Z6K3 402 aaPredicted RBP17.3■□□□□ 0.36
TRA2B-202ENST00000342294 PARGQ86W56 976 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 EXTL1Q92935 676 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 CCDC47Q96A33 483 aaKnown RBP17.3■□□□□ 0.36
TRA2B-202ENST00000342294 BOCQ9BWV1 1114 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 HDAC8Q9BY41 377 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.3■□□□□ 0.36
TRA2B-202ENST00000342294 ACSL6Q9UKU0 697 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 PCDHGA7Q9Y5G6 932 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 KIF26BQ2KJY2 2108 aa17.3■□□□□ 0.36
TRA2B-202ENST00000342294 H3BM21 787 aa17.29■□□□□ 0.36
TRA2B-202ENST00000342294 CETN3O15182 167 aa17.29■□□□□ 0.36
TRA2B-202ENST00000342294 RAD51BO15315 384 aa17.29■□□□□ 0.36
TRA2B-202ENST00000342294 PCDH8O95206 1070 aa17.29■□□□□ 0.36
TRA2B-202ENST00000342294 GJB6O95452 261 aa17.29■□□□□ 0.36
TRA2B-202ENST00000342294 AFPP02771 609 aaKnown RBP17.29■□□□□ 0.36
TRA2B-202ENST00000342294 CMA1P23946 247 aa17.29■□□□□ 0.36
TRA2B-202ENST00000342294 IRAK1P51617 712 aa17.29■□□□□ 0.36
TRA2B-202ENST00000342294 CENPCQ03188 943 aa17.29■□□□□ 0.36
TRA2B-202ENST00000342294 DEFB133Q30KQ1 61 aa17.29■□□□□ 0.36
TRA2B-202ENST00000342294 DCAF17Q5H9S7 520 aaPredicted RBP17.29■□□□□ 0.36
TRA2B-202ENST00000342294 TCERG1LQ5VWI1 586 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms