RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 CCNCP24863 283 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 SOX11P35716 441 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 GRIA1P42261 906 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 BNIP1Q12981 228 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 CNGA3Q16281 694 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 POTEHQ6S545 545 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 DDX53Q86TM3 631 aaKnown RBP6.39□□□□□ -1.39
PRKDC-202ENST00000338368 TAC4Q86UU9 113 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 SCUBE1Q8IWY4 988 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 YIPF3Q9GZM5 350 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 GLOD4Q9HC38 313 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 PIGVQ9NUD9 493 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 ADAM28Q9UKQ2 775 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 OR6C75A6NL08 312 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 DCXO43602 365 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 OR1D2P34982 312 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 HNRNPDQ14103 355 aaKnown RBP6.39□□□□□ -1.39
PRKDC-202ENST00000338368 TTLL9Q3SXZ7 439 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 GDF6Q6KF10 455 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-202ENST00000338368 POU5F2Q8N7G0 328 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 CATSPER2Q96P56 530 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 CASS4Q9NQ75 786 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 UXTQ9UBK9 157 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-202ENST00000338368 SORCS3Q9UPU3 1222 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 TCRBV7S3A2A0A539 114 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 MOXD2PA6NHM9 499 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 C2P06681 752 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 PURAQ00577 322 aaKnown RBP6.39□□□□□ -1.39
PRKDC-202ENST00000338368 ZMAT2Q96NC0 199 aaKnown RBP6.39□□□□□ -1.39
PRKDC-202ENST00000338368 UBA2Q9UBT2 640 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-202ENST00000338368 VTI1BQ9UEU0 232 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 SPTLC1O15269 473 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 KLF1Q13351 362 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-202ENST00000338368 LACTB2Q53H82 288 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-202ENST00000338368 ARCQ7LC44 396 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 SLC22A9Q8IVM8 553 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 TNS4Q8IZW8 715 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 TMEM174Q8WUU8 243 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 KCTD4Q8WVF5 259 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 PBXIP1Q96AQ6 731 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 ZNF558Q96NG5 402 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 XPR1Q9UBH6 696 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 GTF2IRD1Q9UHL9 959 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 SPDYAQ5MJ70 313 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 IFNLR1Q8IU57 520 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-202ENST00000338368 HERC6Q8IVU3 1022 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 OMDQ99983 421 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 PKD2L2Q9NZM6 624 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 NCF1BA6NI72 391 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-202ENST00000338368 NCF1CA8MVU1 366 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-202ENST00000338368 FKBP6O75344 327 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 LRIG2O94898 1065 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 KRT16P08779 473 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 CCDC166P0CW27 439 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 NCF1P14598 390 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-202ENST00000338368 ITGALP20701 1170 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 KRT33BQ14525 404 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 SYTL3Q4VX76 610 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 OTOP3Q7RTS5 596 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 GLT6D1Q7Z4J2 308 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 QKIQ96PU8 341 aaKnown RBP eCLIP6.39□□□□□ -1.394e-9■■■■■ 31.9
PRKDC-202ENST00000338368 RGS18Q9NS28 235 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 FBXW11Q9UKB1 542 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 CRYL1Q9Y2S2 319 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 FKTNO75072 461 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 E2F6O75461 281 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 TYMPP19971 482 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 KCNK10P57789 538 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 THEMIS2Q5TEJ8 643 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 RHBDF2Q6PJF5 856 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 C16orf59Q7L2K0 433 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 SNX19Q92543 992 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 BTN2A3PQ96KV6 586 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 SIKE1Q9BRV8 207 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 TBC1D10AQ9BXI6 508 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 EVA1BQ9NVM1 165 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 THEGQ9P2T0 379 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 A0A0U1RQF3 1178 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 EDN1P05305 212 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 SELPP16109 830 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 IVDP26440 423 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 LIMK2P53671 638 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 WNT3AP56704 352 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 CYLC2Q14093 348 aaPredicted RBP6.39□□□□□ -1.39
PRKDC-202ENST00000338368 WASHC2DQ5SRD0 308 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 C6orf10Q5SRN2 563 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 ANKS6Q68DC2 871 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 PKN3Q6P5Z2 889 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 GANCQ8TET4 914 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 GCATO75600 419 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 TFEBP19484 476 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 CD86P42081 329 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 ESRRGP62508 458 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 SMARCB1Q12824 385 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 PIGWQ7Z7B1 504 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 LCA5Q86VQ0 697 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 ECHDC2Q86YB7 292 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 MFSD3Q96ES6 412 aa6.39□□□□□ -1.39
PRKDC-202ENST00000338368 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.39□□□□□ -1.397e-6■□□□□ 9.9
PRKDC-202ENST00000338368 STK39Q9UEW8 545 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms