RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 GPR22Q99680 433 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 MLPHQ9BV36 600 aaPredicted RBP20.24■□□□□ 0.83
SOX2-201ENST00000325404 GATA5Q9BWX5 397 aaPredicted RBP20.24■□□□□ 0.83
SOX2-201ENST00000325404 EBF3Q9H4W6 596 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 VTI1BQ9UEU0 232 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 STK39Q9UEW8 545 aa20.24■□□□□ 0.83
SOX2-201ENST00000325404 RGSL1A5PLK6 1076 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 HDAC3O15379 428 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 ZBTB24O43167 697 aaPredicted RBP20.23■□□□□ 0.83
SOX2-201ENST00000325404 F9P00740 461 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 FYNP06241 537 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 CD68P34810 354 aaPredicted RBP20.23■□□□□ 0.83
SOX2-201ENST00000325404 FCGRTP55899 365 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 USP4Q13107 963 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 ARL13BQ3SXY8 428 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 HSP90AA5PQ58FG0 334 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 THEMIS2Q5TEJ8 643 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 C16orf89Q6UX73 402 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 SHKBP1Q8TBC3 707 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 GDPD5Q8WTR4 605 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 CNGB3Q9NQW8 809 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 C6orf203Q9P0P8 240 aaPredicted RBP20.23■□□□□ 0.83
SOX2-201ENST00000325404 PDE5AO76074 875 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 SERPINB6P35237 376 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 TKTL1P51854 596 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 DAOAP59103 153 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 ADAM17P78536 824 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 SOX4Q06945 474 aaPredicted RBP20.23■□□□□ 0.83
SOX2-201ENST00000325404 HERC3Q15034 1050 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 UBXN11Q5T124 520 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 LIPMQ5VYY2 423 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 ST13P4Q8IZP2 240 aaPredicted RBP20.23■□□□□ 0.83
SOX2-201ENST00000325404 RP9Q8TA86 221 aaKnown RBP20.23■□□□□ 0.83
SOX2-201ENST00000325404 AZIN2Q96A70 460 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 VPS39Q96JC1 886 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 BCAP29Q9UHQ4 241 aa20.23■□□□□ 0.83
SOX2-201ENST00000325404 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.22■□□□□ 0.83
SOX2-201ENST00000325404 FAM72CH0Y354 149 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 CLGNO14967 610 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 BEST1O76090 585 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 SNUPNO95149 360 aaKnown RBP20.22■□□□□ 0.83
SOX2-201ENST00000325404 FAM200BP0CF97 657 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 NDUFV1P49821 464 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 FAM72AQ5TYM5 149 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 FAM72DQ6L9T8 149 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 LINC00523Q86TU6 105 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 FAM72BQ86X60 149 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 HPS6Q86YV9 775 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 TP53INP2Q8IXH6 220 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 NETO2Q8NC67 525 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 HHIPL1Q96JK4 782 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 TEKT5Q96M29 485 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 AGAP3Q96P47 875 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 CENPKQ9BS16 269 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 KIFC1Q9BW19 673 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 CYP4F11Q9HBI6 524 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 C20orf96Q9NUD7 363 aaPredicted RBP20.22■□□□□ 0.83
SOX2-201ENST00000325404 LOC100653049A0A140TA62 436 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 H3BNX3 289 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 AP1G1O43747 822 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 RNASEH1O60930 286 aaKnown RBP20.22■□□□□ 0.83
SOX2-201ENST00000325404 KRT34O76011 436 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 RPL14P50914 215 aaKnown RBP20.22■□□□□ 0.83
SOX2-201ENST00000325404 CDH17Q12864 832 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 PRKAA1Q13131 559 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 MSLNQ13421 630 aaPredicted RBP20.22■□□□□ 0.83
SOX2-201ENST00000325404 SFT2D3Q587I9 215 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 OGFRL1Q5TC84 451 aaPredicted RBP20.22■□□□□ 0.83
SOX2-201ENST00000325404 NAPEPLDQ6IQ20 393 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 MAPK15Q8TD08 544 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 NCSTNQ92542 709 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 DPF3Q92784 378 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 LENG8Q96PV6 779 aaPredicted RBP20.22■□□□□ 0.83
SOX2-201ENST00000325404 C1QTNF1Q9BXJ1 281 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 ACE2Q9BYF1 805 aaPredicted RBP20.22■□□□□ 0.83
SOX2-201ENST00000325404 RHOJQ9H4E5 214 aa20.22■□□□□ 0.83
SOX2-201ENST00000325404 PIN4Q9Y237 131 aaKnown RBP20.22■□□□□ 0.83
SOX2-201ENST00000325404 SYNJ2BP-COX16A0A087WUM0 186 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 CACNG3O60359 315 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 PRPSAP1Q14558 356 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 RAB41Q5JT25 222 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 HFE2Q6ZVN8 426 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 TMEM151AQ8N4L1 468 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 RNF169Q8NCN4 708 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 DNAJB3Q8WWF6 145 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 MFSD3Q96ES6 412 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 TSNARE1Q96NA8 513 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 TSGA13Q96PP4 275 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 ZNF385DQ9H6B1 395 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 PIDD1Q9HB75 910 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 KLK14Q9P0G3 267 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 COX16Q9P0S2 106 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 TLK1Q9UKI8 766 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 PSMD13Q9UNM6 376 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 TMEM88BA6NKF7 163 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 E9PBE3 544 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 CLDN5O00501 218 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 KLHL41O60662 606 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 USP12O75317 370 aa20.21■□□□□ 0.83
SOX2-201ENST00000325404 DUSP11O75319 330 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms