RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 STYK1Q6J9G0 422 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 GPAT2Q6NUI2 795 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 C3orf33Q6P1S2 294 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 LZTR1Q8N653 840 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 NLNQ9BYT8 704 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 UPB1Q9UBR1 384 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 NAGPAQ9UK23 515 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 KMOO15229 486 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 RAD51CO43502 376 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 PLOD3O60568 738 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 PRR29P0C7W0 189 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 C1QBPQ07021 282 aaKnown RBP9.86□□□□□ -0.83
COL12A1-201ENST00000322507 FOXD4Q12950 439 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-201ENST00000322507 METTL3Q86U44 580 aaKnown RBP9.86□□□□□ -0.83
COL12A1-201ENST00000322507 TRIM48Q8IWZ4 208 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 AGBL3Q8NEM8 1001 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 MTMR8Q96EF0 704 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 GIMAP5Q96F15 307 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 VAT1Q99536 393 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 GRIP2Q9C0E4 1043 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 SLC39A8Q9C0K1 460 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 THAP1Q9NVV9 213 aa9.86□□□□□ -0.83
COL12A1-201ENST00000322507 KIF1AQ12756 1690 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 F5H5T6 163 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 CDK16Q00536 496 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 CCNIQ14094 377 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 MSANTD2Q6P1R3 559 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 SLC35C2Q9NQQ7 365 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 H7C1Q1 480 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 FPGTO14772 594 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 IPO13O94829 963 aaKnown RBP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 CETPP11597 493 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 IL1R1P14778 569 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 CAMK2GQ13555 558 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 FAM98BQ52LJ0 330 aaKnown RBP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 ARHGEF28Q8N1W1 1705 aaKnown RBP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 KIF2BQ8N4N8 673 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 KLHL33A6NCF5 533 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 KDM4BO94953 1096 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 RAB27AP51159 221 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 CENPLQ8N0S6 344 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 STK40Q8N2I9 435 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 FBXL16Q8N461 479 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 TC2NQ8N9U0 490 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 Q96MT0 163 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 E9PBE3 544 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 ZNF283Q8N7M2 679 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 MS4A14Q96JA4 679 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 CCNG1P51959 295 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 ZNF177Q13360 481 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 RNF180Q86T96 592 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 ZNF669Q96BR6 464 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 PCDH9Q9HC56 1237 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 ATP6V1G2-DDX39BF2Z307 99 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 REM1O75628 298 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 SERPINA3P01011 423 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 SCN1BQ07699 218 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 MTMR2Q13614 643 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 ITGA11Q9UKX5 1188 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 IRGMA1A4Y4 181 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 CCNG2Q16589 344 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 ZKSCAN4Q969J2 545 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 THUMPD3Q9BV44 507 aaKnown RBP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 CYP4F12Q9HCS2 524 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 PCDHB7Q9Y5E2 793 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 CCRL2O00421 344 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 CHI3L1P36222 383 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 GPD2P43304 727 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 NEDD8Q15843 81 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 SLFN11Q7Z7L1 901 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 SEPT12Q8IYM1 358 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 GPRC5AQ8NFJ5 357 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 STK32AQ8WU08 396 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 RFKQ969G6 155 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 RRNAD1Q96FB5 475 aaKnown RBP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 C1QTNF7Q9BXJ2 289 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 BCL2L14Q9BZR8 327 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 RACGAP1Q9H0H5 632 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 COPS7BQ9H9Q2 264 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 MEMO1Q9Y316 297 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 ALG5Q9Y673 324 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 MOCS2O96007 188 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 HLA-DRAP01903 254 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 RPS7P62081 194 aaKnown RBP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 MSLNQ13421 630 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-201ENST00000322507 ATP6AP1LQ52LC2 224 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 ANKMY2Q8IV38 441 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 FAM151AQ8WW52 585 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 COLEC11Q9BWP8 271 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 MROH8Q9H579 483 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 SAR1AQ9NR31 198 aa9.85□□□□□ -0.83
COL12A1-201ENST00000322507 TSPAN19P0C672 248 aa9.84□□□□□ -0.83
COL12A1-201ENST00000322507 GSPT2Q8IYD1 628 aaKnown RBP9.84□□□□□ -0.83
COL12A1-201ENST00000322507 CDK20Q8IZL9 346 aa9.84□□□□□ -0.83
COL12A1-201ENST00000322507 FAM84BQ96KN1 310 aaPredicted RBP9.84□□□□□ -0.83
COL12A1-201ENST00000322507 FADS3Q9Y5Q0 445 aa9.84□□□□□ -0.83
COL12A1-201ENST00000322507 GMFGO60234 142 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms