RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 MDH1P40925 334 aaKnown RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 RPL21P46778 160 aaKnown RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 CXCR3P49682 368 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 CSE1LP55060 971 aaKnown RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 ADARP55265 1226 aaKnown RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 CDH4P55283 916 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 ORC1Q13415 861 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 SLC14A2Q15849 920 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 ANKRD20A3Q5VUR7 823 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 MFSD5Q6N075 450 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 TMEM53Q6P2H8 277 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 KLHDC10Q6PID8 442 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 KCNT2Q6UVM3 1135 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 TMC5Q6UXY8 1006 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 FAM126BQ8IXS8 530 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 COLGALT2Q8IYK4 626 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 GALNT15Q8N3T1 639 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 COLGALT1Q8NBJ5 622 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 JOSD2Q8TAC2 188 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 CENPIQ92674 756 aaPredicted RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 KLHL29Q96CT2 875 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 CSPG4P5Q96PW8 444 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 C2orf49Q9BVC5 232 aaPredicted RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 SDCBP2Q9H190 292 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 NOD2Q9HC29 1040 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 CSNK1G1Q9HCP0 422 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 ETNK2Q9NVF9 386 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 DZANK1Q9NVP4 752 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 THEGQ9P2T0 379 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 FAM153AQ9UHL3 310 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 ESYT3A0FGR9 886 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 GMNCA6NCL1 334 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 GLRA3O75311 464 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 ENDOD1O94919 500 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 SERPINF2P08697 491 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 BRAFP15056 766 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 AVPR1AP37288 418 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 BRCC3P46736 316 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 SERPINB8P50452 374 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 PRAMEP78395 509 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 SLC25A11Q02978 314 aaKnown RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 CDH18Q13634 790 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 DMC1Q14565 340 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 SUZ12Q15022 739 aaKnown RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 CYTH1Q15438 398 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 KCTD21Q4G0X4 260 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 IL31Q6EBC2 164 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 PM20D1Q6GTS8 502 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 FBXO25Q8TCJ0 367 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 DQX1Q8TE96 717 aaKnown RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 GLMNQ92990 594 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 CPNE1Q99829 537 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 POLR1EQ9GZS1 481 aaKnown RBP6.11□□□□□ -1.43
SEC22A-201ENST00000309934 MUC3BQ9H195 1237 aa6.11□□□□□ -1.43
SEC22A-201ENST00000309934 SNTNA6NMZ2 147 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 SLC38A8A6NNN8 435 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 PTGESO14684 152 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 HNRNPRO43390 633 aaKnown RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 CXCL10P02778 98 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 FGFR3P22607 806 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 PTGIRP43119 386 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 ST13P50502 369 aaKnown RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 CDK7P50613 346 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 MAGOHP61326 146 aaKnown RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 DAB2P98082 770 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 ITGA9Q13797 1035 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 TBCCQ15814 346 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 MPPE1Q53F39 396 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 ALKBH2Q6NS38 261 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 C3orf62Q6ZUJ4 267 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 KIAA1958Q8N8K9 716 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 C12orf29Q8N999 325 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 HDAC11Q96DB2 347 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 OTUB2Q96DC9 234 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 FAR2Q96K12 515 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 HAUS8Q9BT25 410 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 CDC42EP4Q9H3Q1 356 aaKnown RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 TRABDQ9H4I3 376 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 EML4Q9HC35 981 aaKnown RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 FGFR1OP2Q9NVK5 253 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 KLHL11Q9NVR0 708 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 SCHIP1Q9P0W5 487 aaPredicted RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 MTRRQ9UBK8 725 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 SALL4Q9UJQ4 1053 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 APOBEC2Q9Y235 224 aaKnown RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 ANGPTL3Q9Y5C1 460 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 MYADML2A6NDP7 307 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 H0Y626 953 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 H3BMM5 538 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 RNF103O00237 685 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 CRCPO75575 148 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 LMNAP02545 664 aaKnown RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 GSTA1P08263 222 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 HLA-DPA1P20036 260 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 HOXD11P31277 338 aaPredicted RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 PTGS2P35354 604 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 DSC1Q08554 894 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 PAN2Q504Q3 1202 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms