RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 VDRP11473 427 aa14.91□□□□□ -0.02
COL6A2-201ENST00000300527 MAGEA3P43357 314 aa14.91□□□□□ -0.02
COL6A2-201ENST00000300527 TRAF2Q12933 501 aa14.91□□□□□ -0.02
COL6A2-201ENST00000300527 CBR4Q8N4T8 237 aa14.91□□□□□ -0.02
COL6A2-201ENST00000300527 NAT16Q8N8M0 369 aa14.91□□□□□ -0.02
COL6A2-201ENST00000300527 OR9I1Q8NGQ6 314 aa14.91□□□□□ -0.02
COL6A2-201ENST00000300527 GFM2Q969S9 779 aaKnown RBP14.91□□□□□ -0.02
COL6A2-201ENST00000300527 POLR1BQ9H9Y6 1135 aa14.91□□□□□ -0.02
COL6A2-201ENST00000300527 MTMR10Q9NXD2 777 aa14.91□□□□□ -0.02
COL6A2-201ENST00000300527 HESX1Q9UBX0 185 aa14.91□□□□□ -0.02
COL6A2-201ENST00000300527 COQ6Q9Y2Z9 468 aa14.91□□□□□ -0.02
COL6A2-201ENST00000300527 RBMX2Q9Y388 322 aaKnown RBP14.91□□□□□ -0.02
COL6A2-201ENST00000300527 ATE1O95260 518 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 GNL1P36915 607 aaPredicted RBP14.9□□□□□ -0.02
COL6A2-201ENST00000300527 HMGCS2P54868 508 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 EN1Q05925 392 aaPredicted RBP14.9□□□□□ -0.02
COL6A2-201ENST00000300527 ENPEPQ07075 957 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 NCCRP1Q6ZVX7 275 aaPredicted RBP14.9□□□□□ -0.02
COL6A2-201ENST00000300527 TICAM1Q8IUC6 712 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.9□□□□□ -0.02
COL6A2-201ENST00000300527 DDHD1Q8NEL9 900 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 DLG3Q92796 817 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 CNDP1Q96KN2 507 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 RPL10LQ96L21 214 aaKnown RBP14.9□□□□□ -0.02
COL6A2-201ENST00000300527 CPNE1Q99829 537 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 OSBPL11Q9BXB4 747 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 OLAHQ9NV23 265 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 BFARQ9NZS9 450 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 SOCS2O14508 198 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 GRID2O43424 1007 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 HTRA2O43464 458 aaPredicted RBP14.9□□□□□ -0.02
COL6A2-201ENST00000300527 ALOX15P16050 662 aaPredicted RBP14.9□□□□□ -0.02
COL6A2-201ENST00000300527 PHEXP78562 749 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 GRM3Q14832 879 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 KIZQ2M2Z5 673 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 FGD3Q5JSP0 725 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 TREML2Q5T2D2 321 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 GRTP1Q5TC63 336 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 METTL21CQ5VZV1 264 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 ZPBP2Q6X784 338 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 SLC41A1Q8IVJ1 513 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 RTP4Q96DX8 246 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 ABHD8Q96I13 439 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 RBBP8Q99708 897 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 PRDM12Q9H4Q4 367 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 CHRAC1Q9NRG0 131 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 ZNF277Q9NRM2 450 aaPredicted RBP14.9□□□□□ -0.02
COL6A2-201ENST00000300527 INIPQ9NRY2 104 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 CNTNAP1P78357 1384 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 HEATR9A2RTY3 570 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 UGT1A1P22309 533 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 UGT1A4P22310 534 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 UGT1A3P35503 534 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 UGT1A5P35504 534 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 CSE1LP55060 971 aaKnown RBP14.9□□□□□ -0.02
COL6A2-201ENST00000300527 GNA12Q03113 381 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 PLCL1Q15111 1095 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 MPZL3Q6UWV2 235 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 OR6B3Q8NGW1 331 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 USP33Q8TEY7 942 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 VPS39Q96JC1 886 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 CDHR1Q96JP9 859 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 ZNF670Q9BS34 389 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 CXorf21Q9HAI6 301 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 XPR1Q9UBH6 696 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 CNOT6Q9ULM6 557 aaKnown RBP14.9□□□□□ -0.02
COL6A2-201ENST00000300527 TLL2Q9Y6L7 1015 aa14.9□□□□□ -0.02
COL6A2-201ENST00000300527 C1orf232A0A0U1RR37 186 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 NOL3O60936 208 aaKnown RBP14.89□□□□□ -0.03
COL6A2-201ENST00000300527 ITGADQ13349 1161 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 SURF1Q15526 300 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 CANT1Q8WVQ1 401 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 DCPSQ96C86 337 aaKnown RBP14.89□□□□□ -0.03
COL6A2-201ENST00000300527 QKIQ96PU8 341 aaKnown RBP eCLIP14.89□□□□□ -0.03
COL6A2-201ENST00000300527 EFHD1Q9BUP0 239 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 DEFB129Q9H1M3 183 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 VANGL2Q9ULK5 521 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 TCAF2A6NFQ2 919 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 K7EPI3 171 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 CD247P20963 164 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 HMOX2P30519 316 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 SLC7A2P52569 658 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 PPP1R3AQ16821 1122 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 INSCQ1MX18 579 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 ZNF280DQ6N043 979 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 PNPLA1Q8N8W4 532 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 EXT2Q93063 718 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 FBXL20Q96IG2 436 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 NT5C1AQ9BXI3 368 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 CDT1Q9H211 546 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.89□□□□□ -0.03
COL6A2-201ENST00000300527 ACOT8O14734 319 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 STAG3L1P0CL83 205 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 CCDC130P13994 396 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 TMED10P49755 219 aaKnown RBP14.89□□□□□ -0.03
COL6A2-201ENST00000300527 EIF2B2P49770 351 aaKnown RBP14.89□□□□□ -0.03
COL6A2-201ENST00000300527 EFNA5P52803 228 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 SLC6A3Q01959 620 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 PRKAA1Q13131 559 aa14.89□□□□□ -0.03
COL6A2-201ENST00000300527 TRIM25Q14258 630 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms