RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 SMCHD1A6NHR9 2005 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 CHD4Q14839 1912 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 HEATR9A2RTY3 570 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 DNAJA2O60884 412 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 NMBRP28336 390 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 CRHR1P34998 444 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 NR2C2P49116 596 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 GALK1P51570 392 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 SNAPC2Q13487 334 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 DSELQ8IZU8 1212 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 NAT16Q8N8M0 369 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 ANKRD52Q8NB46 1076 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 DENND1AQ8TEH3 1009 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 ZNF512Q96ME7 567 aaPredicted RBP13.51□□□□□ -0.25
CASC4-201ENST00000299957 NOL11Q9H8H0 719 aaKnown RBP13.51□□□□□ -0.25
CASC4-201ENST00000299957 ORC6Q9Y5N6 252 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 LINC00854A0A1B0GVQ3 168 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 SYNDIG1LA6NDD5 238 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 PSMD12O00232 456 aaPredicted RBP13.51□□□□□ -0.25
CASC4-201ENST00000299957 TNPO2O14787 897 aaKnown RBP13.51□□□□□ -0.25
CASC4-201ENST00000299957 OR4Q2P0C623 313 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 HDCP19113 662 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 ATP6V1B2P21281 511 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 CNTFP26441 200 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 PCSK1P29120 753 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 CYP51A1Q16850 503 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 LIN52Q52LA3 116 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 PQLC1Q8N2U9 271 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 FBXW8Q8N3Y1 598 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 CATSPER1Q8NEC5 780 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 RIN3Q8TB24 985 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 JADE3Q92613 823 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 C1orf50Q9BV19 199 aa13.51□□□□□ -0.25
CASC4-201ENST00000299957 LIN28AQ9H9Z2 209 aaKnown RBP13.51□□□□□ -0.25
CASC4-201ENST00000299957 PNMA8BQ9ULN7 279 aaPredicted RBP13.51□□□□□ -0.25
CASC4-201ENST00000299957 TRPC5OSA6NMA1 111 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 MDM4O15151 490 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 PFDN6O15212 129 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 ANXA9O76027 345 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 THP07101 528 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 HMOX2P30519 316 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 SLC7A2P52569 658 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 CCDC153Q494R4 210 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 HFE2Q6ZVN8 426 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 PLD6Q8N2A8 252 aaKnown RBP13.5□□□□□ -0.25
CASC4-201ENST00000299957 MAGEE2Q8TD90 523 aaPredicted RBP13.5□□□□□ -0.25
CASC4-201ENST00000299957 RNF145Q96MT1 663 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 FTHL17Q9BXU8 183 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 OLA1Q9NTK5 396 aaKnown RBP13.5□□□□□ -0.25
CASC4-201ENST00000299957 CNTNAP1P78357 1384 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 NPR3P17342 541 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 BRCC3P46736 316 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 KCNK10P57789 538 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 PSME3P61289 254 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 ESRP1Q6NXG1 681 aaKnown RBP13.5□□□□□ -0.25
CASC4-201ENST00000299957 MAB21L3Q8N8X9 362 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 TRPC4APQ8TEL6 797 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 TRIM8Q9BZR9 551 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 MROH8Q9H579 483 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 ARMC7Q9H6L4 198 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 GNEQ9Y223 722 aaKnown RBP13.5□□□□□ -0.25
CASC4-201ENST00000299957 SNX5Q9Y5X3 404 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 RGSL1A5PLK6 1076 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 C9IYK1 514 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 PLA2G6O60733 806 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 CKMT2P17540 419 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 NOS2P35228 1153 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 MATKP42679 507 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 OAZ1P54368 228 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 GJA9P57773 515 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 PLCL1Q15111 1095 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 LSM12Q3MHD2 195 aaKnown RBP13.5□□□□□ -0.25
CASC4-201ENST00000299957 CAND1Q86VP6 1230 aaKnown RBP13.5□□□□□ -0.25
CASC4-201ENST00000299957 NRBF2Q96F24 287 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 DCUN1D1Q96GG9 259 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 STRA6Q9BX79 667 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 TRIM15Q9C019 465 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 RERGLQ9H628 205 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 CROTQ9UKG9 612 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 RNF112Q9ULX5 631 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 PCDHGC3Q9UN70 934 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 PPME1Q9Y570 386 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 AP4S1Q9Y587 144 aa13.5□□□□□ -0.25
CASC4-201ENST00000299957 VAV1P15498 845 aa13.49□□□□□ -0.25
CASC4-201ENST00000299957 XRCC1P18887 633 aaPredicted RBP13.49□□□□□ -0.25
CASC4-201ENST00000299957 LSM3P62310 102 aaKnown RBP13.49□□□□□ -0.25
CASC4-201ENST00000299957 MBTD1Q05BQ5 628 aa13.49□□□□□ -0.25
CASC4-201ENST00000299957 C4orf22Q6V702 233 aa13.49□□□□□ -0.25
CASC4-201ENST00000299957 LBX2Q6XYB7 198 aa13.49□□□□□ -0.25
CASC4-201ENST00000299957 TSHZ1Q6ZSZ6 1077 aa13.49□□□□□ -0.25
CASC4-201ENST00000299957 RIOX2Q8IUF8 465 aa13.49□□□□□ -0.25
CASC4-201ENST00000299957 C17orf80Q9BSJ5 609 aa13.49□□□□□ -0.25
CASC4-201ENST00000299957 RGS18Q9NS28 235 aa13.49□□□□□ -0.25
CASC4-201ENST00000299957 SYNPO2Q9UMS6 1093 aa13.49□□□□□ -0.25
CASC4-201ENST00000299957 NENFQ9UMX5 172 aa13.49□□□□□ -0.25
CASC4-201ENST00000299957 AHCYL1O43865 530 aa13.49□□□□□ -0.25
CASC4-201ENST00000299957 TADA2AO75478 443 aa13.49□□□□□ -0.25
CASC4-201ENST00000299957 WFS1O76024 890 aa13.49□□□□□ -0.25
CASC4-201ENST00000299957 CES1P23141 567 aa13.49□□□□□ -0.25
CASC4-201ENST00000299957 CD86P42081 329 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms